Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PP_2254	PP_2255	PP_2256	PP_2257	PP_2258
stress	Geraniol 1 vol%	-0.2	-0.2	-1.3	-0.7	+0.1
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.4	-0.5	-0.9	-0.5	+0.2
nitrogen source	D-2-Aminobutyric (N)	-0.5	-0.4	-0.8	-0.2	-0.2
stress	Growth with Chloride 500 mM; with MOPS	-0.1	-0.6	-0.9	-0.6	+0.4
nitrogen source	D-2-Aminobutyric (N)	-0.6	-1.0	-0.3	+0.2	-0.1
temperature shift	Temperature shift 30_to_25	-0.3	-0.7	-0.7	-0.3	+0.2
stress	Growth with Chloride 500 mM	-0.4	-0.7	-0.5	-0.1	+0.1
nitrogen source	2,6-diaminopimelic (N)	-0.9	-0.2	+0.1	-0.3	-0.4
temperature	Growth at 30C; with MOPS	-1.1	+0.2	+0.1	-0.7	-0.2
pH	Growth at pH7 and (C) Trisodium citrate	-0.4	-0.5	-0.9	+0.3	+0.0
temperature shift	Temperature shift 10_to_25; with MOPS	+0.1	-0.5	-0.9	-0.3	+0.3
pH	pH 6	+0.2	-0.9	-0.5	-0.5	+0.4
carbon source	ferulate (C); with MOPS	-0.9	+0.1	+0.2	-0.8	+0.1
temperature	Growth at 25C	+0.0	-0.3	-1.4	+0.4	+0.1
carbon source	Valerolactone (C)	+0.3	-0.1	-1.3	-0.1	+0.2
carbon source	carbon source 4-vinylphenol 0.01 mM	+0.5	-0.4	-0.8	-0.2	+0.3
phage	P. putida Sci small MOI 0.1	-1.3	+0.1	+1.0	+0.1	-0.1
pH	pH 5	+0.6	+0.3	-0.7	-0.5	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.0	+0.3	+0.5	+0.1	+0.2
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.1	-0.4	+0.8	-0.4	+0.2
nitrogen source	nitrogen source nitrite 1mM	-1.0	+0.5	+0.5	+0.2	+0.1
pH	pH 9	+1.0	-0.1	-0.5	-0.3	+0.3
carbon source	ferulate (C); with MOPS	+0.2	-0.3	+0.3	-0.4	+0.7
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8	+0.5	-0.4	-0.3	+0.3
phage	P. putida PUT10 MOI 10	-0.3	+0.3	+0.5	+0.7	+0.1
phage	P. putida PUT10 MOI 0.1	-0.2	+0.5	+0.4	+0.8	-0.1
nitrogen source	Hydantoin (N)	+0.4	+0.1	+0.9	+0.3	-0.2
nitrogen source	Hydantoin (N)	+0.2	-0.3	+2.0	-0.0	-0.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.2	-0.2	+0.9	+0.8	+0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.4	-0.1	+1.0	+0.5	+0.2