Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_2165 and PP_2166 overlap by 4 nucleotidesPP_2166 and PP_2167 are separated by 148 nucleotidesPP_2167 and PP_2168 are separated by 179 nucleotidesPP_2168 and PP_2169 are separated by 156 nucleotides PP_2165: PP_2165 - Response regulator, at 2,470,436 to 2,471,617 _2165 PP_2166: PP_2166 - Anti-anti-sigma factor, at 2,471,614 to 2,472,096 _2166 PP_2167: PP_2167 - putative PhoD-like phosphatase, at 2,472,245 to 2,474,095 _2167 PP_2168: PP_2168 - Transaldolase, at 2,474,275 to 2,475,201 _2168 PP_2169: PP_2169 - tRNA-dihydrouridine synthase A, at 2,475,358 to 2,476,368 _2169
Group Condition PP_2165 PP_2166 PP_2167 PP_2168 PP_2169
temperature shift Temperature shift 30_to_4 N.D. N.D. -0.4 -5.6 -1.2
carbon source Beta-alanine (C) N.D. N.D. +0.0 -7.2 +0.1
temperature shift Temperature shift 30_to_25 N.D. N.D. -0.6 -6.2 -0.1
carbon source L-Lysine (C) N.D. N.D. -0.1 -7.1 +0.2
temperature shift Temperature shift 30_to_4; with MOPS N.D. N.D. -0.2 -5.6 -1.0
carbon source Ferulic Acid (C) N.D. N.D. -0.1 -6.4 -0.3
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL N.D. N.D. +0.1 -5.6 -1.1
temperature shift Temperature shift 30_to_25; with MOPS N.D. N.D. -0.3 -5.9 -0.5
nitrogen source nitrite (N) N.D. N.D. +0.1 -6.8 +0.0
nitrogen source L-Lysine (N) N.D. N.D. +0.0 -6.3 -0.4
carbon source Hydroxy-L-Proline (C) N.D. N.D. -0.2 -6.6 +0.1
nitrogen source nitrogen source Ammonium chloride 20mM N.D. N.D. -0.2 -6.3 -0.1
carbon source Beta-alanine (C) N.D. N.D. -0.2 -6.5 +0.0
nitrogen source nitrate (N) N.D. N.D. -0.2 -6.0 -0.4
carbon source p-Coumaric (C) N.D. N.D. -0.3 -6.2 +0.0
carbon source Hydroxy-L-Proline (C) N.D. N.D. -0.1 -6.1 -0.2
nitrogen source D-2-Aminobutyric (N) N.D. N.D. -0.1 -5.1 -1.1
carbon source Delta-Undecalactone (C) N.D. N.D. -0.1 -6.2 +0.0
carbon source p-Coumaric (C) N.D. N.D. -0.0 -6.5 +0.3
nitrogen source nitrite (N) N.D. N.D. +0.1 -6.0 -0.3
carbon source L-Lysine (C) N.D. N.D. -0.1 -6.4 +0.2
pH Growth at pH9 and (C) D-Glucose N.D. N.D. -0.1 -5.7 -0.4
carbon source Phenylacetic (C) N.D. N.D. -0.3 -5.9 +0.1
nitrogen source nitrate (N) N.D. N.D. +0.0 -5.9 -0.2
pH Growth at pH9 and (C) D-Glucose N.D. N.D. -0.0 -6.1 +0.1
carbon source Delta-Undecalactone (C) N.D. N.D. -0.1 -6.4 +0.5
temperature shift Temperature shift 10_to_21 N.D. N.D. -0.1 -6.0 +0.2
temperature shift Temperature shift 10_to_25 N.D. N.D. +0.0 -6.2 +0.2
carbon source D-Glucose (C) N.D. N.D. +0.2 -5.9 -0.1
carbon source Phenylacetic (C) N.D. N.D. -0.1 -6.0 +0.2
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