Fitness for 5 genes in Pseudomonas putida KT2440

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1005 experiments or choose conditions or try the comparative fitness browser

500 ntPP_2147 and PP_2148 are separated by 9 nucleotidesPP_2148 and PP_2149 are separated by 167 nucleotidesPP_2149 and PP_2150 are separated by 180 nucleotidesPP_2150 and PP_2151 are separated by 204 nucleotides PP_2147: PP_2147 - conserved exported protein of unknown function, at 2,451,087 to 2,451,659 _2147 PP_2148: PP_2148 - transcription-repair coupling factor, at 2,451,669 to 2,455,118 _2148 PP_2149: PP_2149 - glyceraldehyde-3-phosphate dehydrogenase, at 2,455,286 to 2,456,749 _2149 PP_2150: PP_2150 - putative Thiamine biosynthesis lipoprotein, at 2,456,930 to 2,457,928 _2150 PP_2151: PP_2151 - soluble pyridine nucleotide transhydrogenase, at 2,458,133 to 2,459,527 _2151
Group Condition PP_2147 PP_2148 PP_2149 PP_2150 PP_2151
phage PUT 8 MOI 1 -7.2 -7.1 N.D. +0.5 N.D.
phage PUT8 MOI 0.1 -0.0 -6.7 N.D. +0.1 N.D.
phage PUT8 MOI 0.1 +0.5 -6.4 N.D. -0.3 N.D.
phage P. putida PUT10 MOI 1 -1.2 -5.4 N.D. +0.6 N.D.
phage P. put PUT 10 MOI 10 -0.6 -5.3 N.D. +0.1 N.D.
phage P. put South MOI 0.1 -0.7 -4.7 N.D. -0.2 N.D.
phage P. putida PUT10 MOI 1 -0.6 -5.4 N.D. +0.4 N.D.
phage P. putida PUT10 MOI 10 +0.1 -5.7 N.D. +0.2 N.D.
phage P. putida PUT10 MOI 10 -0.2 -5.6 N.D. +0.6 N.D.
phage P. putida PUT10 MOI 0.1 -0.4 -4.7 N.D. +0.1 N.D.
phage P. putida South MOI 0.1 -0.0 -5.1 N.D. +0.3 N.D.
phage P. put South MOI 1 +0.0 -5.5 N.D. +0.7 N.D.
phage P. put PUT 10 MOI 1 -0.4 -4.5 N.D. +0.3 N.D.
phage P. putida South MOI 1 +0.1 -5.2 N.D. +0.5 N.D.
phage P. put PUT 10 MOI 1 +0.0 -5.0 N.D. +0.4 N.D.
phage PUT8 MOI 10 +0.5 -4.8 N.D. -0.2 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -3.3 -0.7 N.D. -0.5 N.D.
phage P. put PUT 10 MOI 0.1 -0.2 -4.4 N.D. +0.2 N.D.
phage P. put PUT 10 MOI 0.1 -0.3 -4.3 N.D. +0.3 N.D.
phage P. put South MOI 10 -0.3 -3.5 N.D. -0.3 N.D.
phage P. putida PUT10 MOI 0.1 +0.3 -4.6 N.D. +0.2 N.D.
phage P. put South MOI 1 -0.0 -4.1 N.D. +0.1 N.D.
phage P. put PUT 10 MOI 10 +0.6 -5.0 N.D. +0.5 N.D.
phage P. put South MOI 0.1 +0.5 -4.3 N.D. +0.1 N.D.
carbon source ferulate (C); with MOPS -3.0 -0.8 N.D. +0.1 N.D.
phage P. putida South MOI 10 +0.1 -3.4 N.D. -0.2 N.D.
phage P. putida South MOI 0.1 +0.2 -4.3 N.D. +0.6 N.D.
phage PUT8 MOI 10 +0.5 -4.0 N.D. +0.3 N.D.
phage P. putida South MOI 10 +0.5 -3.6 N.D. +0.0 N.D.
carbon source Delta-Nonalactone (C) -1.0 +2.5 N.D. -0.3 N.D.
remove
PP_2147
plot		 remove
PP_2148
plot		 remove
PP_2149		 remove
PP_2150
plot		 remove
PP_2151
plot