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Protein
Homologs
Fitness for 5 genes in
Pseudomonas putida KT2440
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500 nt
PP_2134 and PP_2136 are separated by 658 nucleotides
PP_2136 and PP_2137 are separated by 31 nucleotides
PP_2137 and PP_2138 are separated by 75 nucleotides
PP_2138 and PP_2139 are separated by 100 nucleotides
PP_2134: PP_2134 - transposase, at 2,435,457 to 2,436,422
_2134
PP_2136: PP_2136 - enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase, at 2,437,081 to 2,439,228
_2136
PP_2137: PP_2137 - beta-ketoadipyl CoA thiolase, beta component, at 2,439,260 to 2,440,435
_2137
PP_2138: PP_2138 - conserved protein of unknown function, at 2,440,511 to 2,440,762
_2138
PP_2139: PP_2139 - DNA topoisomerase I, at 2,440,863 to 2,443,472
_2139
Group
Condition
PP
_2134
PP
_2136
PP
_2137
PP
_2138
PP
_2139
carbon source
Tween 20 (C)
N.D.
-6.1
-6.1
-0.4
N.D.
carbon source
Myristic (C)
N.D.
-5.8
-6.2
-0.2
N.D.
carbon source
Butyl stearate (C)
N.D.
-5.6
-6.4
-0.2
N.D.
carbon source
Oleic (C)
N.D.
-5.1
-6.5
-0.2
N.D.
carbon source
Myristic (C)
N.D.
-6.3
-5.4
-0.0
N.D.
carbon source
Delta-Undecalactone (C)
N.D.
-4.8
-6.1
-0.4
N.D.
carbon source
Lauric (C)
N.D.
-4.4
-6.3
-0.5
N.D.
carbon source
Myristic (C)
N.D.
-4.6
-5.7
-0.6
N.D.
carbon source
ferulate (C); with MOPS
N.D.
-5.3
-5.9
+0.5
N.D.
carbon source
Delta-Undecalactone (C)
N.D.
-5.2
-4.9
-0.3
N.D.
carbon source
Delta-Dodecalactone (C)
N.D.
-4.8
-5.6
+0.0
N.D.
carbon source
Octanoic (C)
N.D.
-6.1
-3.9
-0.3
N.D.
carbon source
Lauric (C)
N.D.
-4.8
-5.4
-0.1
N.D.
carbon source
Delta-Dodecalactone (C)
N.D.
-4.7
-5.5
+0.1
N.D.
carbon source
Delta-Decalactone (C)
N.D.
-4.8
-5.6
+0.3
N.D.
carbon source
Oleic (C)
N.D.
-4.9
-5.0
-0.1
N.D.
carbon source
Decanoic (C)
N.D.
-6.0
-3.0
-0.2
N.D.
carbon source
5-Hydroxydodecanoate (C)
N.D.
-3.6
-5.3
-0.1
N.D.
carbon source
Decanoic (C)
N.D.
-4.2
-4.0
-0.7
N.D.
carbon source
Nonanoic (C)
N.D.
-5.9
-2.7
-0.0
N.D.
nitrogen source
NAG (N); with MOPS
N.D.
-2.3
-6.4
+0.1
N.D.
carbon source
Nonanoic (C)
N.D.
-6.3
-1.5
-0.4
N.D.
carbon source
Decanoic (C)
N.D.
-6.2
-1.4
-0.4
N.D.
carbon source
5-Hydroxydodecanoate (C)
N.D.
-2.9
-5.2
+0.2
N.D.
carbon source
ferulate (C); with MOPS
N.D.
-2.9
-4.4
-0.6
N.D.
carbon source
Lauric (C)
N.D.
-5.1
-2.8
+0.0
N.D.
pH
Growth at pH9 and (C) Trisodium citrate
N.D.
-3.5
-4.2
+0.1
N.D.
carbon source
1,3-Hexanediol (C)
N.D.
-3.7
-3.9
+0.3
N.D.
nitrogen source
D-2-Aminobutyric (N)
N.D.
+5.8
+3.9
-0.2
N.D.
nitrogen source
D-2-Aminobutyric (N)
N.D.
+5.3
+3.8
+0.5
N.D.
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