Fitness for 5 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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500 ntPP_2030 and PP_2031 overlap by 4 nucleotidesPP_2031 and PP_2032 overlap by 8 nucleotidesPP_2032 and PP_2033 are separated by 228 nucleotidesPP_2033 and PP_2034 are separated by 35 nucleotides PP_2030: PP_2030 - conserved protein of unknown function, at 2,307,622 to 2,308,116 _2030 PP_2031: PP_2031 - conserved protein of unknown function, at 2,308,113 to 2,309,069 _2031 PP_2032: PP_2032 - putative ATPase, at 2,309,062 to 2,310,021 _2032 PP_2033: PP_2033 - conserved protein of unknown function, at 2,310,250 to 2,311,560 _2033 PP_2034: PP_2034 - conserved membrane protein of unknown function, at 2,311,596 to 2,312,855 _2034
Group Condition PP_2030 PP_2031 PP_2032 PP_2033 PP_2034
phage PUT 8 MOI 1 -2.7 -7.2 -2.6 +0.1 +0.1
phage P. put PUT 10 MOI 10 -5.2 -3.6 -2.9 +0.1 -0.2
phage PUT8 MOI 0.1 -3.1 -3.7 -3.9 -0.0 +0.0
phage P. putida PUT10 MOI 10 -2.2 -4.1 -3.4 +0.1 -0.1
phage P. put South MOI 1 -1.4 -5.9 -2.3 +0.0 +0.0
phage P. putida South MOI 1 -1.8 -4.3 -3.1 +0.0 -0.2
phage P. put South MOI 0.1 -2.8 -3.9 -2.5 -0.2 +0.1
phage P. putida Sci small MOI 0.1 -2.4 -6.0 -0.1 -0.5 -0.1
phage P. putida PUT10 MOI 0.1 -3.6 -3.0 -2.4 +0.2 +0.0
phage P. putida PUT10 MOI 10 -3.4 -3.0 -1.9 -0.1 +0.0
phage P. putida PUT10 MOI 1 -3.3 -1.6 -3.2 +0.0 -0.0
phage P. put PUT 10 MOI 0.1 -2.4 -2.5 -2.8 +0.0 -0.1
pH Growth at pH6 and (C) D-Glucose +0.5 -7.3 -0.4 -0.2 -0.3
phage P. putida Sci small MOI 0.1 -1.8 -5.3 +0.5 -0.4 -0.7
phage P. putida South MOI 0.1 -2.8 -2.2 -2.7 +0.0 +0.1
phage PUT8 MOI 0.1 -3.4 -1.0 -2.9 +0.1 -0.2
phage P. putida South MOI 0.1 -1.8 -3.4 -1.6 -0.1 -0.2
phage P. put PUT 10 MOI 10 -1.7 -2.9 -2.6 +0.1 -0.1
phage P. putida PUT10 MOI 1 -3.2 -1.4 -2.2 +0.0 -0.0
carbon source Delta-Undecalactone (C) -0.7 -4.3 -1.5 +0.0 -0.1
phage P. putida PUT10 MOI 0.1 -2.6 -1.5 -2.3 -0.1 +0.1
phage P. put PUT 10 MOI 1 -2.6 -1.8 -2.1 +0.1 +0.1
phage P. putida Sci Big MOI 0.1 -0.8 -4.3 -0.7 -0.4 -0.2
phage P. put South MOI 0.1 -2.9 -1.7 -1.7 +0.0 +0.1
phage P. put PUT 10 MOI 1 -1.4 -2.3 -2.4 +0.0 +0.0
carbon source DL-3-Hydroxyisobutyric (C) -1.1 -4.4 -0.6 +0.1 -0.0
phage P. put South MOI 1 -1.8 -1.9 -2.1 +0.1 +0.0
stress MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL -0.7 -4.5 -0.7 +0.2 +0.0
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.7 -4.2 -0.7 -0.0 +0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.4 -3.7 -0.6 -0.0 +0.1
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