Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_1998 and PP_1999 are separated by 196 nucleotidesPP_1999 and PP_2000 are separated by 42 nucleotidesPP_2000 and PP_2001 are separated by 16 nucleotidesPP_2001 and PP_2002 overlap by 4 nucleotides PP_1998: PP_1998 - putative cell division protein, at 2,266,235 to 2,266,879 _1998 PP_1999: PP_1999 - membrane protein required for colicin V production, at 2,267,076 to 2,267,633 _1999 PP_2000: PP_2000 - amidophosphoribosyl transferase, at 2,267,676 to 2,269,181 _2000 PP_2001: PP_2001 - O-succinylhomoserine sulfhydrylase, at 2,269,198 to 2,270,409 _2001 PP_2002: PP_2002 - putative enzyme, at 2,270,406 to 2,271,179 _2002
Group Condition PP_1998 PP_1999 PP_2000 PP_2001 PP_2002
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.2 -0.6 -3.3 -6.0 -0.5
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.1 -0.7 -3.0 -5.7 -0.2
carbon source DL-3-Hydroxybutyric (C) +0.1 -0.9 -3.2 -5.4 -0.1
carbon source Protocatechuic Acid (C) +0.2 -1.3 -1.5 -6.8 -0.1
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.2 -0.5 -3.2 -5.3 -0.2
nitrogen source D-2-Aminobutyric (N) -0.5 +0.4 -2.6 -5.2 -1.2
carbon source DL-3-Hydroxyisobutyric (C) +0.3 -1.1 -3.1 -5.4 +0.2
carbon source Ferulic Acid (C) +0.4 -2.2 -0.5 -6.9 +0.2
nitrogen source Hippuric (N) -0.1 -0.5 -3.2 -5.2 +0.1
carbon source 1,2-Propanediol (C) +0.0 -1.0 -2.1 -6.4 +0.5
carbon source Phenylacetic (C) -0.1 +0.3 -1.5 -7.7 +0.0
nitrogen source Hippuric (N) +0.2 -0.8 -3.3 -4.8 -0.1
carbon source Delta-Decalactone (C) -0.8 -1.8 -1.4 -4.8 +0.1
carbon source Delta-Undecalactone (C) +0.2 -1.6 -1.3 -6.1 +0.3
carbon source Delta-Undecalactone (C) +0.2 -1.9 -1.2 -5.7 -0.0
carbon source Hydroxy-L-Proline (C) +0.1 -0.5 -1.6 -6.8 +0.3
carbon source 4-Methyl-2-oxopentanoic (C) -0.1 -2.0 -1.5 -5.4 +0.4
pH D-Glucose (C) pH 6 +0.4 -0.4 -3.2 -4.8 -0.4
carbon source Phenylacetic (C) +0.2 -0.5 -1.2 -7.2 +0.3
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.6 -3.0 +0.4 -5.3 +0.2
carbon source DL-3-Hydroxyisobutyric (C) +0.3 -0.8 -3.3 -4.8 +0.2
carbon source DL-3-Hydroxybutyric (C) +0.0 +0.3 -3.3 -5.3 +0.0
carbon source Protocatechuic Acid (C) -0.1 -0.8 -1.2 -7.0 +0.7
pH D-Glucose (C) pH 6 +0.5 -0.8 -3.2 -4.7 -0.1
pH Growth at pH7 and (C) D-Glucose +0.4 -1.9 -0.3 -5.5 -0.9
carbon source Vanillin (C) -0.3 +0.4 -1.4 -6.8 -0.1
carbon source 2-Methylbutanoic (C) +0.5 -0.3 -2.8 -5.5 +0.1
carbon source Glycerol (C) +0.3 -1.2 -1.3 -5.9 +0.2
carbon source 1,4-Butanediol (C) +0.1 +0.5 -1.6 -6.4 -0.3
carbon source Vanillic Acid (C) +0.4 +0.3 -2.1 -5.8 +0.3
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