Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_1986 and PP_1987 are separated by 118 nucleotidesPP_1987 and PP_1988 are separated by 54 nucleotidesPP_1988 and PP_1989 are separated by 63 nucleotidesPP_1989 and PP_1990 are separated by 703 nucleotides PP_1986: PP_1986 - 3-isopropylmalate dehydratase small subunit, at 2,252,100 to 2,252,744 _1986 PP_1987: PP_1987 - Methlytransferase, UbiE/COQ5 family, at 2,252,863 to 2,253,627 _1987 PP_1988: PP_1988 - 3-isopropylmalate dehydrogenase, at 2,253,682 to 2,254,764 _1988 PP_1989: PP_1989 - Aspartate-semialdehyde dehydrogenase, at 2,254,828 to 2,255,940 _1989 PP_1990: PP_1990 - transposase, at 2,256,644 to 2,257,945 _1990
Group Condition PP_1986 PP_1987 PP_1988 PP_1989 PP_1990
pH Growth at pH6 and (C) D-Glucose -5.9 -5.2 -3.8 N.D. N.D.
carbon source L-Lysine (C) -6.7 -0.3 -7.6 N.D. N.D.
carbon source p-Coumaric (C) -6.5 -0.5 -7.4 N.D. N.D.
nitrogen source L-Lysine (N) -6.7 +0.2 -7.9 N.D. N.D.
nitrogen source L-Arginine (N) -6.0 -0.5 -7.8 N.D. N.D.
carbon source 3-Hydroxypropionate (C) -6.8 +0.0 -7.4 N.D. N.D.
carbon source Phenylacetic (C) -6.5 -0.4 -7.2 N.D. N.D.
carbon source Phenylacetic (C) -6.4 -0.2 -7.4 N.D. N.D.
carbon source benzoic (C) -6.7 +0.4 -7.7 N.D. N.D.
carbon source Protocatechuic Acid (C) -6.5 -0.2 -7.2 N.D. N.D.
carbon source Protocatechuic Acid (C) -6.6 -0.3 -6.9 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -6.6 -0.8 -6.3 N.D. N.D.
nitrogen source L-Lysine (N) -5.9 +0.0 -7.9 N.D. N.D.
nitrogen source L-Histidine (N) -6.7 -0.2 -6.8 N.D. N.D.
carbon source Vanillin (C) -6.5 -0.1 -7.2 N.D. N.D.
carbon source Ferulic Acid (C) -6.6 +0.0 -7.1 N.D. N.D.
pH Growth at pH6 and (C) Trisodium citrate -5.9 -0.7 -6.9 N.D. N.D.
nitrogen source L-Ornithine (N) -6.6 -0.3 -6.5 N.D. N.D.
carbon source Protocatechuic Acid (C) -6.4 -0.0 -6.8 N.D. N.D.
pH Growth at pH7 and (C) Trisodium citrate -5.7 -2.5 -5.0 N.D. N.D.
carbon source 1,2-Propanediol (C) -6.7 +0.1 -6.5 N.D. N.D.
carbon source Glycerol (C) -6.6 +0.4 -6.9 N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -6.9 +0.5 -6.5 N.D. N.D.
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -6.0 +0.4 -7.3 N.D. N.D.
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) -6.5 +0.2 -6.5 N.D. N.D.
carbon source Ferulic Acid (C) -6.5 +0.3 -6.6 N.D. N.D.
pH Growth at pH6 and (C) Trisodium citrate -6.1 +0.5 -7.1 N.D. N.D.
temperature shift Temperature shift 10_to_25; with MOPS -5.9 +0.4 -6.9 N.D. N.D.
carbon source Decanoic (C) -5.9 +0.7 -6.7 N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -6.5 +1.1 -6.2 N.D. N.D.
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