Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1680	PP_1681	PP_1682	PP_1683	PP_1684
nitrogen source	Ethanolamine (N)	N.D.	-3.5	-0.1	-0.7	+0.1
nitrogen source	Ethanolamine (N)	N.D.	-3.5	-0.1	-0.7	+0.1
nitrogen source	NAG (N); with MOPS	N.D.	-1.0	-0.1	-1.9	-0.9
pH	Valerolactone (C) pH 6.5	N.D.	-0.3	-0.1	-2.8	-0.3
nitrogen source	NAG (N); with MOPS	N.D.	-1.3	-0.2	-1.4	-0.4
carbon source	DL-3-Hydroxyisobutyric (C)	N.D.	-0.7	+0.1	-2.8	+0.2
carbon source	3-methyl-1-butanol (C)	N.D.	-1.8	-0.1	-0.7	-0.3
pH	D-Glucose (C) pH 6.5	N.D.	-0.4	-0.1	-2.4	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	N.D.	-0.3	+0.0	-2.9	+0.2
carbon source	3-methyl-1-butanol 0.1 vol% (C)	N.D.	-2.6	-0.1	+0.1	-0.2
pH	D-Glucose (C) pH 7.5	N.D.	-0.2	-0.0	-2.6	+0.1
nitrogen source	NAG (N)	N.D.	-0.7	-0.2	-1.7	-0.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	-0.7	-0.1	-1.6	-0.1
temperature shift	Temperature shift 30_to_25; with MOPS	N.D.	-1.9	-0.1	-0.1	-0.4
carbon source	Valerolactone (C)	N.D.	-0.1	-0.2	-1.5	-0.6
carbon source	4-Methyl-2-oxopentanoic (C)	N.D.	-2.2	-0.0	-0.4	+0.2
stress	MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL	N.D.	-0.5	+0.1	-1.9	+0.0
pH	Growth at pH8 and (C) D-Glucose	N.D.	-1.4	-0.2	-0.8	+0.1
carbon source	carbon source 4-vinylphenol 0.1 mM	N.D.	-0.9	-0.1	-1.2	+0.3
stress	Growth with Chloride 500 mM; with MOPS	N.D.	-1.1	-0.0	-1.2	+0.4
nitrogen source	Urea (N); with MOPS	N.D.	-0.8	-0.0	-1.3	+0.3
nitrogen source	L-Leucine (N)	N.D.	-2.1	-0.0	+0.3	+0.0
carbon source	propionate (C)	N.D.	-2.3	+0.1	+0.3	+0.2
pH	Growth at pH6 and (C) D-Glucose	N.D.	-1.4	+0.0	+0.4	-0.6
carbon source	4-Methyl-2-oxopentanoic (C)	N.D.	-2.0	-0.0	+0.6	+0.0
nitrogen source	Ammonium chloride (N)	N.D.	-1.7	+0.1	+0.6	-0.1
pH	Growth at pH6 and (C) D-Glucose	N.D.	-1.6	+0.2	+0.6	+0.3
nitrogen source	Ammonium chloride (N)	N.D.	-1.4	-0.1	+0.8	+0.4
phage	PUT 8 MOI 1	N.D.	+0.7	+0.1	-1.5	+0.4
nitrogen source	nitrite (N)	N.D.	-1.8	+0.0	+1.6	+0.1