Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_1611 and PP_1612 are separated by 154 nucleotidesPP_1612 and PP_1613 are separated by 168 nucleotidesPP_1613 and PP_1614 overlap by 4 nucleotidesPP_1614 and PP_1615 are separated by 127 nucleotides PP_1611: PP_1611 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 1,807,950 to 1,808,795 _1611 PP_1612: PP_1612 - Enolase, at 1,808,950 to 1,810,239 _1612 PP_1613: PP_1613 - essential cell division protein, at 1,810,408 to 1,810,689 _1613 PP_1614: PP_1614 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,810,686 to 1,811,393 _1614 PP_1615: PP_1615 - Transcriptional regulator, LysR family, at 1,811,521 to 1,812,417 _1615
Group Condition PP_1611 PP_1612 PP_1613 PP_1614 PP_1615
carbon source 3-Hydroxyhexanoic (C) +0.2 N.D. N.D. N.D. -4.1
carbon source 3-Hydroxyhexanoic (C) -0.0 N.D. N.D. N.D. -3.4
carbon source rac-3-Hydroxypentanoic Acid (C) +0.1 N.D. N.D. N.D. -3.0
carbon source rac-3-Hydroxypentanoic Acid (C) +0.1 N.D. N.D. N.D. -2.8
stress Formaldehyde 0.03125 vol% +0.0 N.D. N.D. N.D. -2.7
carbon source Vanillin (C) -0.4 N.D. N.D. N.D. -2.2
carbon source Ferulic Acid (C) +0.1 N.D. N.D. N.D. -2.8
carbon source Ferulic Acid (C) -0.2 N.D. N.D. N.D. -2.3
carbon source Vanillin (C) -0.1 N.D. N.D. N.D. -2.1
carbon source Vanillic Acid (C) -0.2 N.D. N.D. N.D. -2.0
carbon source Vanillic Acid (C) +0.1 N.D. N.D. N.D. -2.2
nitrogen source Betaine (N) -0.1 N.D. N.D. N.D. -1.9
carbon source ferulate (C); with MOPS -0.4 N.D. N.D. N.D. -1.5
nitrogen source Betaine (N) -0.1 N.D. N.D. N.D. -1.7
carbon source Vanillin (C) -0.0 N.D. N.D. N.D. -1.8
carbon source 3-hydroxypentanoate -0.2 N.D. N.D. N.D. -1.5
carbon source Vanillin (C) -0.2 N.D. N.D. N.D. -1.6
carbon source D-Mannose (C) -0.9 N.D. N.D. N.D. -0.5
carbon source ferulate (C); with MOPS +0.1 N.D. N.D. N.D. -1.4
temperature shift Temperature shift 30_to_21; with MOPS -0.5 N.D. N.D. N.D. -0.7
carbon source D-Fructose (C) -0.6 N.D. N.D. N.D. -0.6
pH pH 5 -0.6 N.D. N.D. N.D. -0.3
carbon source D-Fructose (C) -0.5 N.D. N.D. N.D. -0.4
carbon source Cholinium lysinate (C) +0.1 N.D. N.D. N.D. -1.0
carbon source ferulate (C); with MOPS +0.3 N.D. N.D. N.D. -1.1
temperature shift Temperature shift 10_to_25; with MOPS +0.4 N.D. N.D. N.D. -0.8
nitrogen source NAG (N); with MOPS +0.4 N.D. N.D. N.D. -0.7
temperature Growth at 34C +0.4 N.D. N.D. N.D. -0.5
micoeukaryotes C.elegans, mixed culture-2 +0.8 N.D. N.D. N.D. -0.2
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 N.D. N.D. N.D. +0.9
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