Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_1419 and PP_1420 are separated by 200 nucleotidesPP_1420 and PP_1421 overlap by 20 nucleotidesPP_1421 and PP_1422 are separated by 65 nucleotidesPP_1422 and PP_1423 are separated by 49 nucleotides PP_1419: PP_1419 - tricarboxylate-specific outer membrane porin, at 1,618,945 to 1,620,234 _1419 PP_1420: PP_1420 - Transcriptional regulatory protein tctD, at 1,620,435 to 1,621,106 _1420 PP_1421: PP_1421 - putative Sensor histidine kinase TctE, at 1,621,087 to 1,622,478 _1421 PP_1422: PP_1422 - conserved protein of unknown function, at 1,622,544 to 1,623,356 _1422 PP_1423: PP_1423 - conserved protein of unknown function, at 1,623,406 to 1,624,347 _1423
Group Condition PP_1419 PP_1420 PP_1421 PP_1422 PP_1423
carbon source Trisodium citrate (C) -1.4 -5.2 -5.8 -0.4 N.D.
pH Growth at pH6 and (C) Trisodium citrate -1.4 -5.7 -4.7 -0.2 N.D.
pH Growth at pH6 and (C) Trisodium citrate -2.1 -3.3 -5.0 -1.0 N.D.
pH Growth at pH7 and (C) Trisodium citrate -1.5 -4.6 -5.7 +0.4 N.D.
pH Growth at pH6 and (C) Trisodium citrate -1.9 -5.7 -3.8 +0.1 N.D.
pH Growth at pH7 and (C) Trisodium citrate -1.1 -5.9 -3.8 -0.4 N.D.
pH Growth at pH7 and (C) Trisodium citrate -2.0 -4.2 -4.3 -0.2 N.D.
pH Growth at pH9 and (C) Trisodium citrate -0.6 -5.4 -4.2 +0.1 N.D.
carbon source Trisodium citrate (C) -2.9 -3.7 -3.8 +0.3 N.D.
pH Growth at pH9 and (C) Trisodium citrate -1.1 -4.1 -4.4 +0.1 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.6 -4.9 -4.1 +0.1 N.D.
pH Growth at pH8 and (C) Trisodium citrate -0.7 -4.0 -4.9 +0.1 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.5 -4.9 -3.8 -0.2 N.D.
pH Growth at pH6 and (C) Trisodium citrate -1.1 -4.3 -3.4 -0.4 N.D.
pH Growth at pH9 and (C) Trisodium citrate -1.2 -4.5 -3.1 -0.3 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -1.1 -3.9 -4.3 +0.2 N.D.
pH Growth at pH8 and (C) Trisodium citrate -0.6 -2.9 -5.2 -0.3 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.4 -3.7 -3.8 +0.1 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.9 -4.0 -3.7 +0.1 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.9 -4.0 -3.3 -0.1 N.D.
pH Growth at pH6 and (C) Trisodium citrate -2.0 -3.1 -3.1 -0.0 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.4 -4.0 -3.0 +0.1 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.2 -4.9 -3.5 +0.3 N.D.
carbon source L-tyrosine 5 mM (C) -1.1 -3.2 -3.9 +0.2 N.D.
carbon source M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C; then outgrowth in LB -0.7 -4.5 -3.0 +0.1 N.D.
carbon source M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C -0.7 -4.0 -3.5 +0.2 N.D.
pH Growth at pH6 and (C) Trisodium citrate -1.5 -2.7 -3.5 -0.1 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.4 -3.5 -4.0 +0.2 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.4 -3.7 -2.9 +0.4 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.4 -3.7 -3.6 +0.1 N.D.
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