Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas putida KT2440
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 989 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
PP_1378 and PP_1379 are separated by 9 nucleotides
PP_1379 and PP_1380 are separated by 11 nucleotides
PP_1380 and PP_1381 are separated by 10 nucleotides
PP_1381 and PP_1382 are separated by 52 nucleotides
PP_1378: PP_1378 - alpha-ketoglutarate permease, at 1,570,580 to 1,571,869
_1378
PP_1379: PP_1379 - 3-carboxy-cis,cis-muconate cycloisomerase, at 1,571,879 to 1,573,231
_1379
PP_1380: PP_1380 - 3-oxoadipate enol-lactonase 2, at 1,573,243 to 1,574,034
_1380
PP_1381: PP_1381 - 4-carboxymuconolactone decarboxylase, at 1,574,045 to 1,574,437
_1381
PP_1382: PP_1382 - putative porin-encoding gene, at 1,574,490 to 1,575,014
_1382
Group
Condition
PP
_1378
PP
_1379
PP
_1380
PP
_1381
PP
_1382
carbon source
Vanillin (C)
-1.5
-7.5
-7.1
-5.4
-0.1
carbon source
Protocatechuic Acid (C)
-1.8
-6.4
-6.9
-5.3
-0.1
carbon source
Protocatechuic Acid (C)
-1.8
-7.0
-6.1
-5.3
-0.2
carbon source
Vanillic Acid (C)
-1.6
-7.6
-5.3
-5.5
-0.1
carbon source
4-Hydroxybenzoic Acid (C)
-1.4
-6.8
-6.2
-5.4
+0.1
carbon source
Protocatechuic Acid (C)
-1.7
-7.0
-5.6
-5.4
-0.0
carbon source
Protocatechuic Acid (C)
-1.6
-6.6
-5.9
-5.4
-0.0
carbon source
Ferulic Acid (C)
-1.4
-6.0
-5.7
-5.4
+0.0
carbon source
p-Coumaric (C)
-1.7
-6.6
-6.0
-3.7
+0.0
carbon source
Vanillin (C)
-1.5
-5.4
-4.9
-5.3
-0.4
carbon source
Ferulic Acid (C)
-1.3
-6.1
-4.5
-5.3
-0.0
carbon source
p-Coumaric (C)
-1.7
-6.9
-5.9
-2.6
-0.1
carbon source
ferulate (C); with MOPS
-1.6
-4.5
-5.4
-5.0
+0.2
carbon source
Quinic Acid (C)
-1.8
-4.8
-5.0
-4.8
+0.0
carbon source
p-Coumaric (C)
-1.6
-5.4
-4.3
-5.0
+0.1
carbon source
Vanillin (C)
-1.2
-5.8
-5.4
-3.7
+0.0
carbon source
4-Hydroxybenzoic Acid (C)
-1.6
-5.6
-5.3
-3.6
-0.1
carbon source
Vanillin (C)
-1.4
-5.0
-4.7
-5.1
+0.1
carbon source
Vanillic Acid (C)
-1.6
-6.0
-4.9
-3.0
+0.3
carbon source
p-Coumaric (C)
-1.2
-5.3
-3.6
-5.0
+0.2
carbon source
Quinic Acid (C)
-1.6
-3.6
-4.1
-4.8
+0.0
carbon source
ferulate (C); with MOPS
-1.5
-4.7
-3.6
-3.4
-0.7
carbon source
4-Hydroxybenzoic Acid (C)
-1.3
-4.4
-3.1
-2.8
+0.0
carbon source
p-Coumaric (C)
-1.1
-3.4
-2.8
-3.3
+0.1
carbon source
Crotonic (C)
-0.7
-2.3
-3.3
-4.2
+0.1
carbon source
ferulate (C); with MOPS
-1.4
-3.5
-2.7
-2.8
+0.4
carbon source
benzoic (C)
-1.9
-0.9
-6.4
-0.5
+0.0
carbon source
Ferulic Acid (C)
-0.9
-2.1
-2.4
-3.0
-0.3
carbon source
benzoic (C)
-2.0
-0.8
-5.5
+0.3
-0.0
carbon source
benzoic (C)
-1.5
-0.9
-4.3
+0.4
+0.1
remove
PP_1378
plot
remove
PP_1379
plot
remove
PP_1380
remove
PP_1381
plot
remove
PP_1382
plot