Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1269	PP_1270	PP_1271	PP_1272	PP_1273
phage	P. putida Sci small MOI 0.1	-4.9	-0.4	-0.2	-0.7	-0.9
pH	Growth at pH6 and (C) D-Glucose	-5.2	-0.2	-1.0	+0.0	-0.2
phage	P. putida Sci small MOI 0.1	-5.2	-0.1	-0.3	-0.4	-0.5
temperature	Growth at 30C; with MOPS	-5.2	-0.5	+0.3	+0.1	-0.3
nitrogen source	nitrate (N)	-5.1	-0.2	-0.2	+0.1	+0.1
pH	Growth at pH7 and (C) Trisodium citrate	-5.0	-0.1	-0.1	-0.1	+0.1
nitrogen source	NAG (N); with MOPS	-5.1	+0.1	-0.1	-0.2	+0.1
stress	Growth with Chloride 200 mM	-5.2	+0.2	-0.0	-0.1	+0.2
stress	R2A with Fusaric 480 ug/mL	-0.6	-0.4	-1.7	-0.7	-1.3
phage	P. putida PUT 7 MOI 1	-4.4	-0.3	+0.5	-0.1	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-4.0	-0.0	+0.3	-0.2	+0.0
nitrogen source	2,6-diaminopimelic (N)	-3.5	+0.1	+0.7	-0.0	-1.0
stress	R2A with Fusaric 480 ug/mL	-0.2	-0.9	-0.8	-0.9	-1.0
carbon source	Valeric (C)	-2.7	+0.0	-0.4	-0.2	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-4.2	+0.0	+0.2	+0.1	+0.2
stress	R2A with Fusaric 480 ug/mL	+0.1	-0.8	-1.1	-1.0	-0.8
nitrogen source	nitrogen source nitrite 0.5mM	-3.6	+0.3	-0.1	-0.0	+0.1
carbon source	1,3-Hexanediol (C)	-3.2	+0.1	-0.1	+0.0	+0.1
carbon source	Valerolactone (C)	-3.3	+0.1	+0.2	-0.2	+0.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.9	+0.1	-1.1	+0.2	-0.4
pH	D-Glucose (C) pH 6.5	-3.4	-0.3	+0.1	+0.2	+0.3
stress	R2A with Fusaric 480 ug/mL	+0.3	-0.9	-1.0	-0.9	-0.6
stress	R2A with Fusaric 480 ug/mL	+0.4	-1.0	-0.8	-0.8	-0.8
nitrogen source	Propandiamine (N)	-2.0	-0.3	-0.8	-0.0	+0.2
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-2.5	+0.3	-0.5	+0.2	-0.1
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-3.0	+0.2	+0.2	+0.1	-0.0
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.5	+0.2	+0.0	-0.3	+0.3
carbon source	4-Methyl-2-oxopentanoic (C)	-2.8	+0.2	-0.1	+0.2	+0.4
stress	R2A with Fusaric 480 ug/mL	+1.3	-0.6	-1.6	-0.4	-0.5
carbon source	ferulate (C); with MOPS	-2.5	-0.0	+0.6	+0.0	+0.1