Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PP_1267	PP_1268	PP_1269	PP_1270	PP_1271
pH	Growth at pH7 and (C) Trisodium citrate	+0.2	-1.8	-5.0	-0.1	-0.1
pH	Growth at pH6 and (C) D-Glucose	+0.1	-0.4	-5.2	-0.2	-1.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	-3.4	-1.9	+0.1	-1.1
nitrogen source	NAG (N); with MOPS	-0.1	-0.8	-5.1	+0.1	-0.1
phage	P. putida Sci small MOI 0.1	+0.1	+0.1	-5.2	-0.1	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.4	-0.9	-4.0	-0.0	+0.3
pH	Growth at pH9 and (C) Trisodium citrate	+0.3	-5.2	-0.1	-0.3	+0.1
phage	P. putida PUT 7 MOI 1	-0.5	-0.3	-4.4	-0.3	+0.5
temperature	Growth at 30C; with MOPS	-0.1	+0.6	-5.2	-0.5	+0.3
nitrogen source	nitrate (N)	+0.2	+0.5	-5.1	-0.2	-0.2
phage	P. put South MOI 10	+0.2	-5.3	+0.1	+0.1	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.1	-3.2	-1.5	+0.1	+0.1
phage	P. putida Sci small MOI 0.1	+0.2	+1.0	-4.9	-0.4	-0.2
carbon source	D-Glucose (C); with MOPS	-0.3	-3.3	-0.7	-0.2	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	-0.4	-4.2	+0.0	+0.2
temperature shift	Temperature shift 30_to_4; with MOPS	+0.2	-2.5	-1.7	-0.1	+0.1
stress	Growth with Chloride 200 mM	+0.2	+0.9	-5.2	+0.2	-0.0
phage	P. putida Sci Big MOI 0.1	-0.4	-2.9	+0.8	-0.1	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4	-1.2	-2.5	+0.2	+0.0
nitrogen source	nitrogen source nitrite 0.5mM	+0.5	-0.0	-3.6	+0.3	-0.1
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.4	-1.9	-1.5	+0.2	+0.7
nitrogen source	2,6-diaminopimelic (N)	+0.2	-0.2	-3.5	+0.1	+0.7
carbon source	1,3-Hexanediol (C)	+0.0	+0.9	-3.2	+0.1	-0.1
phage	P. put PUT 10 MOI 10	-0.1	-3.2	+1.1	+0.0	+0.3
temperature shift	Temperature shift 30_to_25; with MOPS	+0.3	-3.0	+0.9	+0.1	-0.1
phage	P. putida South MOI 10	-0.5	-3.0	+1.2	+0.4	+0.2
carbon source	ferulate (C); with MOPS	+0.2	-2.4	+1.0	+0.1	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.2	-2.4	+1.4	-0.3	-0.2
nitrogen source	Propandiamine (N)	+0.0	+2.7	-2.0	-0.3	-0.8
carbon source	L-Alanine (C)	+0.2	+1.7	-2.2	+0.3	-0.1