Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_1063 and PP_1064 are separated by 54 nucleotidesPP_1064 and PP_1065 are separated by 17 nucleotidesPP_1065 and PP_1066 are separated by 23 nucleotidesPP_1066 and PP_1067 overlap by 4 nucleotides PP_1063: PP_1063 - DNA-binding transcriptional regulator, homocysteine-binding, at 1,217,492 to 1,218,409 _1063 PP_1064: PP_1064 - Hydrolase, alpha/beta fold family, at 1,218,464 to 1,219,600 _1064 PP_1065: PP_1065 - membrane protein required for efficient alginate biosynthesis, at 1,219,618 to 1,219,953 _1065 PP_1066: PP_1066 - C4-dicarboxylate transport transcriptional regulatory protein, at 1,219,977 to 1,221,305 _1066 PP_1067: PP_1067 - Sensor histidine kinase, at 1,221,302 to 1,223,209 _1067
Group Condition PP_1063 PP_1064 PP_1065 PP_1066 PP_1067
carbon source L-Glutamic (C) +0.1 +0.1 -0.3 -4.2 -4.4
carbon source L-Glutamic (C) -0.3 -0.1 -0.1 -4.4 -3.7
nitrogen source DL-2-Aminobutyric (N) +0.2 -0.1 -0.2 -2.9 -3.6
carbon source L-Glutamine (C) -0.1 +0.1 -0.2 -3.2 -3.2
nitrogen source DL-2-Aminobutyric (N) -0.1 -0.1 -0.4 -1.9 -2.9
carbon source L-Glutamic (C) -0.1 -0.3 +0.0 -2.7 -2.2
nitrogen source L-Glutamic (N) -0.1 +0.1 +0.0 -2.4 -2.3
nitrogen source L-Glutamic (N) +0.0 +0.0 -0.1 -2.0 -1.8
carbon source carbon source 3-O-methyl-glucose 50 mM -2.3 -0.7 -0.2 -0.3 -0.3
carbon source carbon source D-Glucose 55.5 mM -4.0 +0.1 +0.2 +0.0 -0.1
carbon source carbon source Bisabolene 48.9 mM -2.8 -0.2 -0.1 -0.5 -0.1
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -2.8 -0.2 -0.2 +0.1 -0.0
carbon source carbon source Bisabolol 45 mM -2.4 +0.1 -0.1 -0.2 -0.0
carbon source carbon source 3-O-methyl-glucose 10 mM -2.0 +0.3 -0.4 -0.3 -0.1
phage P. putida Sci small MOI 0.1 -0.0 +0.1 -0.2 -2.3 +0.1
nitrogen source L-Aspartate (N) -0.3 +0.1 -0.1 -1.2 -0.9
phage P. putida Missley MOI 0.1 +0.3 -0.6 -0.4 -1.1 -0.2
carbon source carbon source 2-Deoxy-D-glucose 50 mM -1.7 +0.3 -0.3 -0.4 -0.0
carbon source carbon source 4-vinylphenol 0.01 mM -1.9 +0.1 -0.1 +0.6 -0.0
pH pH 7 -2.1 +0.4 +0.0 +0.3 -0.0
carbon source Decanoic (C) -0.4 +0.1 +0.0 +1.0 +1.2
stress Growth with Chloride 500 mM +0.0 -0.1 +0.1 +1.4 +1.1
stress Growth with Chloride 500 mM +0.1 +0.0 +0.1 +1.4 +1.3
carbon source 1-Pentanol (C) +0.1 +0.3 +0.2 +1.1 +1.3
stress Growth with Chloride 500 mM; with MOPS -0.1 +0.0 +0.1 +1.3 +1.8
stress Growth with Chloride 500 mM; with MOPS +0.1 -0.4 -0.0 +1.7 +1.8
stress Growth with Chloride 500 mM; with MOPS +0.1 -0.1 -0.1 +1.5 +1.8
stress Growth with Chloride 500 mM; with MOPS -0.2 -0.0 +0.1 +1.9 +1.7
stress Growth with Chloride 500 mM; with MOPS +0.2 -0.2 -0.1 +1.8 +2.0
stress Growth with Chloride 500 mM; with MOPS +0.0 +0.1 +0.1 +1.9 +1.8
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