Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 1005 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PP_0995	PP_0996	PP_0997	PP_0998	PP_0999
nitrogen source	Hippuric (N)	-1.9	+0.2	-5.7	+0.1	+0.1
nitrogen source	Hippuric (N)	-1.8	+0.1	-5.0	-0.2	+0.1
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.3	+0.2	-0.0	-2.0	-4.1
carbon source	Delta-Nonalactone (C)	-1.4	+0.1	-4.5	-0.1	-0.3
nitrogen source	Glycine (N)	-0.8	+0.2	-4.5	+0.1	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-2.0	-0.2	+0.4	-0.7	-2.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.3	-0.0	-0.4	-1.7	-2.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.9	-0.1	-0.3	-0.6	-2.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.0	-0.0	-0.1	-1.6	-2.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	+0.0	+0.1	-1.8	-3.3
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.2	-0.2	-0.1	-1.4	-2.8
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.4	-0.2	+0.0	-1.4	-2.6
nitrogen source	Glycine (N)	-0.6	+0.0	-4.0	+0.1	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.4	-0.2	-0.1	-1.6	-2.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	-0.2	-0.2	-1.2	-2.7
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.1	-0.1	-0.1	-2.0	-2.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-0.0	-0.1	-0.0	-1.7	-2.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	-0.1	-0.1	-1.2	-2.6
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-0.3	-0.1	-0.1	-1.6	-1.9
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.4	+0.1	-0.0	-0.8	-1.8
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.3	+0.0	-0.3	-1.6	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.1	+0.4	-0.3	-1.7	-2.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-1.4	-0.1	-0.0	+0.2	-2.3
carbon source	Delta-Decalactone (C)	-1.6	+0.2	-2.2	-0.1	+0.1
carbon source	ferulate (C); with MOPS	-2.3	-0.2	+0.1	+0.1	-1.4
r2a control	R2A control	-0.2	+0.0	+0.2	-1.6	-2.0
carbon source	Delta-Decalactone (C)	-1.5	-0.0	-2.3	-0.0	+0.6
nitrogen source	nitrogen source nitrate 5mM	+0.4	+0.3	-0.5	-1.6	-1.5
nitrogen source	NAG (N); with MOPS	+0.4	+0.3	+0.0	+0.1	-2.9
temperature	Growth at 25C; with MOPS	+0.6	+0.1	-0.3	-1.7	+1.1