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Protein
Homologs
Fitness for 5 genes in
Pseudomonas putida KT2440
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500 nt
PP_0964 and PP_0965 are separated by 91 nucleotides
PP_0965 and PP_0966 are separated by 286 nucleotides
PP_0966 and PP_0967 are separated by 2 nucleotides
PP_0967 and PP_0968 are separated by 115 nucleotides
PP_0964: PP_0964 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,103,242 to 1,104,507
_0964
PP_0965: PP_0965 - ATP phosphoribosyltransferase (EC 2.4.2.17)
(from data)
, at 1,104,599 to 1,105,234
_0965
PP_0966: PP_0966 - Histidinol dehydrogenase, at 1,105,521 to 1,106,846
_0966
PP_0967: PP_0967 - histidinol-phosphate aminotransferase (EC 2.6.1.9)
(from data)
, at 1,106,849 to 1,107,895
_0967
PP_0968: PP_0968 - conserved protein of unknown function, at 1,108,011 to 1,109,252
_0968
Group
Condition
PP
_0964
PP
_0965
PP
_0966
PP
_0967
PP
_0968
carbon source
Phenylacetic (C)
N.D.
-5.9
-7.3
-7.8
+0.0
carbon source
Delta-Undecalactone (C)
N.D.
-5.9
-7.2
-7.7
+0.0
carbon source
Vanillic Acid (C)
N.D.
-6.4
-7.4
-6.9
+0.0
carbon source
Delta-Undecalactone (C)
N.D.
-6.1
-6.9
-7.6
+0.1
nitrogen source
nitrogen source Ammonium chloride 20mM
N.D.
-6.4
-6.7
-7.5
+0.2
carbon source
Vanillin (C)
N.D.
-5.3
-7.5
-7.3
-0.2
carbon source
L-Lysine (C)
N.D.
-5.6
-7.4
-7.1
-0.1
carbon source
L-Lysine (C)
N.D.
-5.6
-7.4
-7.1
+0.0
carbon source
Beta-alanine (C)
N.D.
-6.5
-6.7
-6.8
-0.0
carbon source
4-Methyl-2-oxopentanoic (C)
N.D.
-5.7
-7.3
-6.9
-0.0
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
-5.8
-7.3
-6.5
-0.1
carbon source
Hydroxy-L-Proline (C)
N.D.
-5.8
-7.1
-6.5
-0.0
carbon source
Phenylacetic (C)
N.D.
-6.1
-6.7
-6.5
-0.1
carbon source
4-Methyl-2-oxopentanoic (C)
N.D.
-5.4
-7.0
-7.1
+0.1
carbon source
4-Hydroxybenzoic Acid (C)
N.D.
-5.6
-6.8
-7.0
+0.0
carbon source
Protocatechuic Acid (C)
N.D.
-5.6
-6.9
-6.9
+0.0
carbon source
Beta-alanine (C)
N.D.
-5.8
-7.2
-6.3
-0.1
temperature shift
Temperature shift 30_to_25
N.D.
-5.2
-6.8
-7.1
-0.1
carbon source
Protocatechuic Acid (C)
N.D.
-4.9
-7.2
-6.9
-0.0
temperature shift
Temperature shift 30_to_25
N.D.
-5.9
-6.0
-7.3
+0.0
carbon source
Protocatechuic Acid (C)
N.D.
-6.2
-7.2
-5.6
-0.1
carbon source
Ferulic Acid (C)
N.D.
-5.3
-6.5
-7.2
+0.1
carbon source
Ferulic Acid (C)
N.D.
-5.3
-7.2
-6.4
+0.0
carbon source
Hydroxy-L-Proline (C)
N.D.
-5.1
-7.0
-6.7
+0.0
carbon source
DL-3-Hydroxyisobutyric (C)
N.D.
-6.4
-6.0
-6.4
+0.1
carbon source
Glycerol (C)
N.D.
-5.5
-6.9
-6.4
+0.1
stress
MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
N.D.
-6.0
-6.1
-6.4
-0.1
carbon source
Vanillin (C)
N.D.
-5.6
-6.7
-6.3
+0.2
stress
MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL
N.D.
-6.0
-5.9
-6.4
-0.1
carbon source
Levulinic Acid (C)
N.D.
-5.8
-6.0
-6.8
+0.2
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