Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_0957 and PP_0958 are separated by 248 nucleotidesPP_0958 and PP_0959 overlap by 4 nucleotidesPP_0959 and PP_0960 overlap by 1 nucleotidesPP_0960 and PP_0961 are separated by 9 nucleotides PP_0957: PP_0957 - D-arabinose 5-phosphate isomerase, at 1,098,591 to 1,099,565 _0957 PP_0958: PP_0958 - phospholipid ABC transporter ATP-binding subunit, at 1,099,814 to 1,100,623 _0958 PP_0959: PP_0959 - phospholipid ABC transporter, at 1,100,620 to 1,101,420 _0959 PP_0960: PP_0960 - phospholipid ABC transporter binding protein, at 1,101,420 to 1,101,905 _0960 PP_0961: PP_0961 - toluene tolerance protein, at 1,101,915 to 1,102,562 _0961
Group Condition PP_0957 PP_0958 PP_0959 PP_0960 PP_0961
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.6 -4.3 -5.1 -5.2 -4.9
carbon source 2,3-Butanediol (C) -1.8 -3.2 -4.4 -4.3 -5.0
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.3 -4.6 -4.6 -4.4 -5.4
stress Geraniol 1 vol% -0.2 -4.1 -4.3 -4.1 -5.2
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.1 -4.2 -4.3 -4.7 -3.2
stress R2A with Fusaric 480 ug/mL +0.2 -3.8 -4.3 -4.3 -3.4
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.0 -4.5 -4.3 -3.5 -3.3
carbon source ferulate (C); with MOPS -1.1 -2.7 -2.0 -4.5 -5.2
carbon source Delta-Decalactone (C) +0.5 -3.8 -4.8 -2.7 -4.3
carbon source Vanillin (C) -1.0 -3.4 -3.9 -3.6 -3.1
stress R2A with Fusaric 480 ug/mL -0.2 -2.4 -5.3 -2.9 -3.9
stress R2A with Fusaric 480 ug/mL +0.8 -4.9 -1.8 -4.1 -4.7
stress R2A with Fusaric 480 ug/mL -0.3 -3.2 -4.4 -2.8 -3.8
micoeukaryotes Tetrahymena sp., Mixed culture-1 -2.1 -4.4 +0.9 -5.3 -2.9
nitrogen source Ammonium chloride and TNT (N) +0.0 -2.3 -4.4 -3.1 -4.0
nitrogen source Ammonium chloride and TNT (N) +0.1 -2.9 -4.2 -2.9 -3.5
carbon source Decanoic (C) -0.3 -3.7 -2.7 -3.5 -3.1
stress R2A with Fusaric 480 ug/mL -0.7 -4.3 -0.6 -3.9 -3.7
phage P. putida PUT10 MOI 10 -0.2 -2.6 -5.3 -2.5 -2.5
phage P. put South MOI 1 +0.4 -2.7 -5.4 -2.9 -2.4
nitrogen source Ammonium chloride and TNT (N) -0.0 -2.8 -3.1 -3.1 -3.8
nitrogen source Ammonium chloride and TNT (N) -0.4 -1.6 -3.5 -3.9 -3.1
carbon source Vanillin (C) +0.2 -3.5 -3.3 -2.7 -3.0
stress 2-Ethylhexanol 0.4 vol% -0.3 -3.7 -1.5 -3.4 -3.2
stress pinene 10 vol% +0.6 -2.6 -4.8 -2.7 -2.6
carbon source ferulate (C); with MOPS -0.1 -2.5 -2.6 -3.8 -2.8
phage P. putida South MOI 10 +0.3 -2.3 -5.0 -2.1 -2.6
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.7 -2.4 -3.4 -2.8 -2.6
phage P. putida South MOI 1 +1.3 -2.1 -3.8 -2.1 -3.4
nitrogen source D-2-Aminobutyric (N) -1.5 +2.9 +2.9 +3.0 +1.8
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