Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_5461 and PP_0878 are separated by 230 nucleotidesPP_0878 and PP_0879 overlap by 1 nucleotidesPP_0879 and PP_0880 are separated by 10 nucleotidesPP_0880 and PP_0881 are separated by 10 nucleotides PP_5461: PP_5461 - protein of unknown function, at 1,017,382 to 1,017,861 _5461 PP_0878: PP_0878 - dipeptide ABC transporter, binding subunit, at 1,018,092 to 1,019,060 _0878 PP_0879: PP_0879 - dipeptide ABC transporter - putative ATP binding subunit, at 1,019,060 to 1,020,028 _0879 PP_0880: PP_0880 - dipeptide ABC transporter - putative membrane subunit, at 1,020,039 to 1,020,965 _0880 PP_0881: PP_0881 - dipeptide ABC transporter - putative membrane subunit, at 1,020,976 to 1,021,986 _0881
Group Condition PP_5461 PP_0878 PP_0879 PP_0880 PP_0881
carbon source L-Isoleucine (C) -0.0 -1.9 -2.2 -2.1 -2.5
carbon source L-Alanine (C) +0.1 -2.2 -2.2 -1.4 -1.9
carbon source L-Isoleucine (C) -0.1 -1.5 -1.8 -2.1 -2.1
nitrogen source D-2-Aminobutyric (N) -0.3 -2.2 -1.4 -1.4 -0.5
nitrogen source D-2-Aminobutyric (N) +0.3 -0.9 -0.9 -1.8 -1.6
carbon source L-Leucine (C) -0.1 -0.6 -0.6 -1.9 -1.8
carbon source Ferulic Acid (C) +0.1 -1.2 -0.7 -2.4 -0.7
carbon source 3-methyl-1-butanol (C) +0.1 -1.4 -1.3 -1.2 -1.1
carbon source L-Lysine 10 mM (C) +0.1 -0.9 -0.8 -1.7 -1.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.0 -1.3 -0.9 -1.8 -0.6
carbon source L-Leucine (C) +0.1 -1.5 -1.2 -0.7 -1.1
pH pH 9 +0.3 -1.0 -1.4 -1.1 -1.1
carbon source Vanillin (C) -0.1 -0.8 -1.3 -0.9 -1.1
nitrogen source nitrite (N) -0.1 -1.1 -0.8 -1.0 -0.8
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.1 -0.7 -0.9 -1.4 -0.6
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.0 -0.7 -1.0 -1.0 -0.9
carbon source Vanillin (C) -0.1 -0.9 -0.5 -0.9 -1.2
carbon source carbon source 3-O-methyl-glucose 50 mM +0.1 -1.6 -1.4 +0.4 -0.8
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.2 -1.1 -0.4 -0.9 -1.1
carbon source Vanillic Acid (C) +0.1 -0.9 -0.5 -0.7 -1.3
carbon source Vanillin (C) +0.1 -0.8 -0.8 -0.8 -1.1
carbon source Ferulic Acid (C) +0.2 -0.6 -0.7 -1.2 -0.8
carbon source butyrate (C) +0.2 -1.3 -1.6 -0.2 -0.2
carbon source carbon source 4-vinylphenol 0.01 mM -0.1 -1.5 -1.7 +0.5 -0.2
pH Growth at pH7 and (C) D-Glucose -0.0 +0.3 -0.8 -2.1 +0.7
carbon source Hexanoic (C) -0.1 +1.1 +0.5 +1.4 +1.1
micoeukaryotes C.elegans, mixed culture-1 -0.0 +0.9 +1.3 +1.1 +0.9
carbon source Delta-Nonalactone (C) +0.1 +1.6 +0.8 +1.5 +1.2
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.0 +0.9 +0.8 +2.1 +1.7
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.0 +1.4 +1.4 +1.4 +1.3
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