Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_0732 and PP_0733 overlap by 4 nucleotidesPP_0733 and PP_0734 overlap by 1 nucleotidesPP_0734 and PP_0735 overlap by 7 nucleotidesPP_0735 and PP_0736 overlap by 8 nucleotides PP_0732: PP_0732 - Glutamyl-tRNA reductase, at 851,222 to 852,499 _0732 PP_0733: PP_0733 - Peptide chain release factor 1, at 852,496 to 853,578 _0733 PP_0734: PP_0734 - release factor-(glutamine-N5) methyltransferase, at 853,578 to 854,408 _0734 PP_0735: PP_0735 - molybdopterin-synthase adenylyltransferase, at 854,402 to 855,157 _0735 PP_0736: PP_0736 - Glutamate racemase, at 855,150 to 855,947 _0736
Group Condition PP_0732 PP_0733 PP_0734 PP_0735 PP_0736
carbon source L-Arginine (C) N.D. N.D. N.D. -5.1 N.D.
nitrogen source nitrogen source nitrate 20mM N.D. N.D. N.D. -4.8 N.D.
pH Growth at pH9 and (C) Trisodium citrate N.D. N.D. N.D. -4.7 N.D.
carbon source Vanillin (C) N.D. N.D. N.D. -4.7 N.D.
carbon source 4-Methyl-2-oxopentanoic (C) N.D. N.D. N.D. -4.6 N.D.
pH Growth at pH9 and (C) Trisodium citrate N.D. N.D. N.D. -4.6 N.D.
carbon source 3-Methyl-2-Oxobutanoic Acid (C) N.D. N.D. N.D. -4.6 N.D.
stress Growth with Chloride 200 mM N.D. N.D. N.D. -4.6 N.D.
pH Growth at pH6 and (C) D-Glucose N.D. N.D. N.D. -4.6 N.D.
carbon source 3-Hydroxypropionate (C) N.D. N.D. N.D. -4.5 N.D.
nitrogen source nitrate (N) N.D. N.D. N.D. -4.5 N.D.
nitrogen source nitrate (N) N.D. N.D. N.D. -4.5 N.D.
nitrogen source NAG (N); with MOPS N.D. N.D. N.D. -4.5 N.D.
temperature shift Temperature shift 30_to_25 N.D. N.D. N.D. -4.4 N.D.
carbon source acetate (C) N.D. N.D. N.D. -4.4 N.D.
carbon source 3-methyl-1-butanol 0.1 vol% (C) N.D. N.D. N.D. -4.4 N.D.
nitrogen source NAG (N) N.D. N.D. N.D. -4.4 N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs N.D. N.D. N.D. -4.4 N.D.
pH Growth at pH8 and (C) Trisodium citrate N.D. N.D. N.D. -4.4 N.D.
pH Growth at pH7 and (C) Trisodium citrate N.D. N.D. N.D. -4.4 N.D.
temperature shift Temperature shift 30_to_25 N.D. N.D. N.D. -4.4 N.D.
temperature shift Temperature shift 30_to_25 N.D. N.D. N.D. -4.4 N.D.
temperature shift Temperature shift 30_to_25; with MOPS N.D. N.D. N.D. -4.3 N.D.
temperature shift Temperature shift 30_to_25; with MOPS N.D. N.D. N.D. -4.3 N.D.
temperature shift Temperature shift 30_to_25; with MOPS N.D. N.D. N.D. -4.3 N.D.
carbon source ferulate (C); with MOPS N.D. N.D. N.D. -4.2 N.D.
carbon source ferulate (C); with MOPS N.D. N.D. N.D. -4.2 N.D.
carbon source Myristic (C) N.D. N.D. N.D. -4.1 N.D.
nitrogen source nitrate (N) N.D. N.D. N.D. -3.9 N.D.
carbon source D-Glucose (C) with 20AA_mix_minus_His N.D. N.D. N.D. -3.9 N.D.
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