Fitness for 5 genes in Pseudomonas putida KT2440

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1005 experiments or choose conditions or try the comparative fitness browser

500 ntPP_0731 and PP_0732 are separated by 804 nucleotidesPP_0732 and PP_0733 overlap by 4 nucleotidesPP_0733 and PP_0734 overlap by 1 nucleotidesPP_0734 and PP_0735 overlap by 7 nucleotides PP_0731: PP_0731 - phosphatidylcholine synthase, at 848,582 to 850,417 _0731 PP_0732: PP_0732 - Glutamyl-tRNA reductase, at 851,222 to 852,499 _0732 PP_0733: PP_0733 - Peptide chain release factor 1, at 852,496 to 853,578 _0733 PP_0734: PP_0734 - release factor-(glutamine-N5) methyltransferase, at 853,578 to 854,408 _0734 PP_0735: PP_0735 - molybdopterin-synthase adenylyltransferase, at 854,402 to 855,157 _0735
Group Condition PP_0731 PP_0732 PP_0733 PP_0734 PP_0735
carbon source L-Arginine (C) -0.1 N.D. N.D. N.D. -5.1
pH Growth at pH9 and (C) Trisodium citrate -0.1 N.D. N.D. N.D. -4.7
stress Growth with Chloride 200 mM -0.2 N.D. N.D. N.D. -4.6
nitrogen source nitrogen source nitrate 20mM +0.0 N.D. N.D. N.D. -4.8
carbon source 3-Hydroxypropionate (C) -0.1 N.D. N.D. N.D. -4.5
carbon source Vanillin (C) +0.1 N.D. N.D. N.D. -4.7
carbon source 4-Methyl-2-oxopentanoic (C) +0.1 N.D. N.D. N.D. -4.6
pH Growth at pH9 and (C) Trisodium citrate +0.1 N.D. N.D. N.D. -4.6
temperature shift Temperature shift 30_to_25 -0.1 N.D. N.D. N.D. -4.4
temperature shift Temperature shift 30_to_25; with MOPS -0.2 N.D. N.D. N.D. -4.3
nitrogen source nitrate (N) -0.0 N.D. N.D. N.D. -4.5
carbon source 3-Methyl-2-Oxobutanoic Acid (C) +0.1 N.D. N.D. N.D. -4.6
pH Growth at pH7 and (C) Trisodium citrate -0.1 N.D. N.D. N.D. -4.4
nitrogen source nitrate (N) +0.0 N.D. N.D. N.D. -4.5
pH Growth at pH8 and (C) Trisodium citrate -0.0 N.D. N.D. N.D. -4.4
nitrogen source NAG (N) +0.0 N.D. N.D. N.D. -4.4
pH Growth at pH6 and (C) D-Glucose +0.1 N.D. N.D. N.D. -4.6
carbon source Myristic (C) -0.3 N.D. N.D. N.D. -4.1
temperature shift Temperature shift 30_to_25 +0.1 N.D. N.D. N.D. -4.4
carbon source acetate (C) +0.2 N.D. N.D. N.D. -4.4
nitrogen source NAG (N); with MOPS +0.2 N.D. N.D. N.D. -4.5
temperature shift Temperature shift 30_to_25 +0.2 N.D. N.D. N.D. -4.4
temperature shift Temperature shift 30_to_25; with MOPS +0.1 N.D. N.D. N.D. -4.3
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.3 N.D. N.D. N.D. -4.4
temperature shift Temperature shift 30_to_25; with MOPS +0.1 N.D. N.D. N.D. -4.3
carbon source ferulate (C); with MOPS +0.1 N.D. N.D. N.D. -4.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 N.D. N.D. N.D. -4.4
nitrogen source nitrate (N) -0.0 N.D. N.D. N.D. -3.9
carbon source ferulate (C); with MOPS +0.3 N.D. N.D. N.D. -4.2
carbon source D-Glucose (C) with 20AA_mix_minus_His +0.1 N.D. N.D. N.D. -3.9
remove
PP_0731
plot		 remove
PP_0732
plot		 remove
PP_0733		 remove
PP_0734
plot		 remove
PP_0735
plot