Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0703	PP_0704	PP_0705	PP_0706	PP_0707
pH	Growth at pH7 and (C) Trisodium citrate	-0.8	+0.0	-1.4	-0.3	-0.1
phage	P. putida PUT 7 MOI 1	-0.6	-0.5	-0.2	-1.2	+0.1
phage	P. putida Sci Big MOI 0.1	-0.2	-0.2	-0.8	-0.7	-0.3
nitrogen source	2,6-diaminopimelic (N)	-0.7	-0.1	-0.9	-0.1	-0.3
nitrogen source	NAG (N); with MOPS	-0.4	+0.3	-0.6	-0.8	-0.2
phage	P. putida Sci small MOI 0.1	+0.2	-0.6	-0.7	-0.5	-0.3
pH	Growth at pH7 and (C) Trisodium citrate	-1.4	-0.3	+0.2	-0.2	-0.0
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.3	-1.8	-0.1	-0.0	+0.0
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.2	-2.0	+0.4	+0.1	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.2	-1.7	+0.1	-0.1	+0.1
pH	Growth at pH8 and (C) Trisodium citrate	-0.4	+0.4	-0.7	-0.7	+0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.4	-1.5	+0.1	-0.2	-0.0
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.7	+0.4	-0.7	+0.1	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-0.0	-1.5	+0.4	+0.2	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.4	-1.5	+0.3	-0.1	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.4	-1.6	+0.3	-0.0	-0.0
phage	PUT 8 MOI 1	-0.6	-0.8	-0.0	+0.5	+0.2
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.4	-1.4	+0.5	-0.1	-0.0
nitrogen source	D-2-Aminobutyric (N)	-0.6	+0.5	-0.6	+0.5	-0.3
temperature	Growth at 25C	-0.2	+0.9	-0.6	-0.4	+0.4
no stress control	Growth with no stress	-0.6	+0.9	-0.6	+0.2	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6	+0.6	+0.2	+0.5	-0.5
pH	Growth at pH7 and (C) D-Glucose	+0.6	-0.5	+0.6	-0.4	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+4.9	-3.3	+0.8	-0.3	-1.5
pH	pH 7	+0.5	-0.6	+0.5	+0.4	-0.2
carbon source	carbon source Bisabolene 48.9 mM	+0.9	-0.2	+0.6	+0.2	-0.3
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+5.1	-2.8	+0.6	-0.1	-1.4
carbon source	carbon source 4-vinylphenol 0.1 mM	+0.7	-0.5	+0.8	+0.1	+0.2
pH	pH 6	+0.5	-0.2	+1.0	+0.4	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+4.8	-2.4	+0.8	+0.1	-1.2