Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0569	PP_0570	PP_0571	PP_0572	PP_0573
temperature shift	Temperature shift 10_to_30; with MOPS	-0.7	-0.6	-0.1	-0.6	+0.1
carbon source	carbon source 3-O-methyl-glucose 50 mM	-1.3	-0.3	-0.2	+0.1	+0.1
phage	P. putida Missley MOI 0.1	+0.0	-0.1	-0.7	-0.4	-0.3
carbon source	Myristic (C)	-0.6	-0.3	-0.2	-0.5	+0.1
nitrogen source	Ammonium chloride (N)	-0.4	-0.5	-0.2	-0.4	+0.1
temperature shift	Temperature shift 30_to_34; with MOPS	-0.2	-0.5	-0.3	-0.5	+0.0
stress	Growth with Chloride 500 mM; with MOPS	-0.4	-0.6	-0.2	-0.3	+0.1
pH	Growth at pH9 and (C) Trisodium citrate	-0.5	-0.5	+0.1	-0.6	+0.1
pH	Growth at pH9 and (C) D-Glucose	-0.3	-0.3	-0.1	-0.6	+0.1
carbon source	5-Aminovaleric 10 mM (C)	-0.4	-0.3	-0.3	-0.4	+0.1
nitrogen source	Urea (N)	-0.2	-0.4	-0.2	-0.6	+0.1
temperature shift	Temperature shift 10_to_21; with MOPS	-0.2	-0.4	-0.3	-0.5	+0.1
nitrogen source	nitrite (N)	-0.1	-0.4	-0.3	-0.6	+0.1
phage	P. putida Sci small MOI 0.1	-0.2	+0.1	-0.6	-0.4	-0.3
pH	Growth at pH9 and (C) Trisodium citrate	+0.1	-0.4	+0.2	-1.0	-0.1
nitrogen source	Urea (N); with MOPS	-0.2	-0.5	-0.0	-0.7	+0.1
phage	P. putida Sci Big MOI 0.1	-0.4	+0.2	-0.4	-0.1	-0.5
carbon source	Ethanol (C)	-0.3	-0.4	-0.2	-0.4	+0.1
pH	Growth at pH8 and (C) D-Glucose	-0.1	-0.5	-0.1	-0.7	+0.2
temperature shift	Temperature shift 30_to_34	-0.2	-0.4	-0.4	-0.4	+0.2
temperature shift	Temperature shift 30_to_21; with MOPS	-0.0	-0.6	-0.1	-0.5	+0.2
stress	Growth with Chloride 500 mM; with MOPS	-0.3	-0.6	-0.2	-0.2	+0.3
carbon source	DL-2-Aminoadipic 10 mM (C)	+0.2	-0.5	-0.1	-0.6	-0.1
temperature	Growth at 30C; with MOPS	-0.4	-0.5	-0.1	-0.3	+0.3
nitrogen source	nitrite (N)	-0.3	-0.4	-0.1	-0.3	+0.3
carbon source	Valeric (C)	+0.4	-0.3	+0.2	-0.6	+0.1
pH	Growth at pH6 and (C) Trisodium citrate	+0.3	-0.6	+0.1	-0.4	+0.3
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.6	-0.0	+0.3	+0.1	+0.3
nitrogen source	Ammonium chloride (N)	+0.4	-0.5	-0.0	-0.2	+0.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	+0.2	+0.6	+0.1	+0.5	+0.1