Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_0437 and PP_0438 overlap by 11 nucleotidesPP_0438 and PP_0439 overlap by 32 nucleotidesPP_0439 and PP_t01 are separated by 152 nucleotidesPP_t01 and PP_t02 are separated by 24 nucleotides PP_0437: PP_0437 - bifunctional biotin-[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA, at 530,087 to 531,046 _0437 PP_0438: PP_0438 - Type III pantothenate kinase, at 531,036 to 531,785 _0438 PP_0439: PP_0439 - conserved protein of unknown function, at 531,754 to 532,218 _0439 PP_t01: PP_t01 - tRNA-Tyr, at 532,371 to 532,454 _t01 PP_t02: PP_t02 - tRNA-Gly, at 532,479 to 532,552 _t02
Group Condition PP_0437 PP_0438 PP_0439 PP_t01 PP_t02
nitrogen source NAG (N); with MOPS N.D. N.D. -1.6 N.D. N.D.
carbon source 3-Methyl-2-Oxobutanoic Acid (C) N.D. N.D. -1.5 N.D. N.D.
dilutelb LB 0.1x with 55.5 mM D-Glucose N.D. N.D. -1.5 N.D. N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM N.D. N.D. -1.4 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. -1.2 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. N.D. -1.1 N.D. N.D.
carbon source Decanoic (C) N.D. N.D. -1.1 N.D. N.D.
phage P. putida PUT10 MOI 0.1 N.D. N.D. +1.1 N.D. N.D.
phage P. putida South MOI 10 N.D. N.D. +1.1 N.D. N.D.
phage PUT8 MOI 0.1 N.D. N.D. +1.1 N.D. N.D.
phage P. put South MOI 0.1 N.D. N.D. +1.1 N.D. N.D.
phage P. put PUT 10 MOI 1 N.D. N.D. +1.2 N.D. N.D.
phage P. put PUT 10 MOI 0.1 N.D. N.D. +1.2 N.D. N.D.
nitrogen source D-2-Aminobutyric (N) N.D. N.D. +1.2 N.D. N.D.
phage P. putida PUT10 MOI 0.1 N.D. N.D. +1.2 N.D. N.D.
phage P. putida PUT 7 MOI 1 N.D. N.D. +1.2 N.D. N.D.
phage P. putida PUT10 MOI 1 N.D. N.D. +1.3 N.D. N.D.
phage P. put PUT 10 MOI 10 N.D. N.D. +1.3 N.D. N.D.
phage P. putida PUT10 MOI 1 N.D. N.D. +1.3 N.D. N.D.
phage P. put South MOI 1 N.D. N.D. +1.4 N.D. N.D.
phage P. putida Missley MOI 0.1 N.D. N.D. +1.4 N.D. N.D.
phage P. put South MOI 0.1 N.D. N.D. +1.4 N.D. N.D.
phage P. putida South MOI 1 N.D. N.D. +1.5 N.D. N.D.
phage P. put PUT 10 MOI 10 N.D. N.D. +1.5 N.D. N.D.
phage P. putida South MOI 0.1 N.D. N.D. +1.5 N.D. N.D.
phage PUT8 MOI 0.1 N.D. N.D. +1.6 N.D. N.D.
phage P. putida South MOI 0.1 N.D. N.D. +1.6 N.D. N.D.
phage P. putida PUT10 MOI 10 N.D. N.D. +1.6 N.D. N.D.
phage P. putida PUT10 MOI 10 N.D. N.D. +1.8 N.D. N.D.
phage P. put South MOI 1 N.D. N.D. +1.8 N.D. N.D.
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