Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_0421 and PP_0422 overlap by 4 nucleotidesPP_0422 and PP_0423 are separated by 147 nucleotidesPP_0423 and PP_0424 overlap by 4 nucleotidesPP_0424 and PP_0425 are separated by 190 nucleotides PP_0421: PP_0421 - Anthranilate phosphoribosyltransferase, at 509,981 to 511,030 _0421 PP_0422: PP_0422 - Indole-3-glycerol phosphate synthase, at 511,027 to 511,860 _0422 PP_0423: PP_0423 - conserved protein of unknown function, at 512,008 to 512,712 _0423 PP_0424: PP_0424 - DNA-binding transcriptional dual regulator, at 512,709 to 513,353 _0424 PP_0425: PP_0425 - conserved protein of unknown function, at 513,544 to 513,966 _0425
Group Condition PP_0421 PP_0422 PP_0423 PP_0424 PP_0425
carbon source L-Lysine (C) -6.9 -7.9 N.D. -0.1 -0.4
carbon source Vanillic Acid (C) -5.2 -8.0 N.D. +0.1 -0.7
carbon source Delta-Undecalactone (C) -5.7 -7.9 N.D. +0.3 -0.6
carbon source 4-Methyl-2-oxopentanoic (C) -5.4 -7.9 N.D. +0.0 -0.3
carbon source L-Lysine (C) -6.2 -7.1 N.D. -0.1 -0.2
carbon source Glycerol (C) -4.8 -7.8 N.D. -0.1 -0.6
carbon source Delta-Undecalactone (C) -5.8 -7.0 N.D. +0.0 -0.4
carbon source 4-Methyl-2-oxopentanoic (C) -5.0 -7.4 N.D. -0.3 -0.4
carbon source 3-Hydroxypropionate (C) -5.5 -7.3 N.D. +0.3 -0.4
carbon source Vanillin (C) -5.3 -7.2 N.D. +0.1 -0.5
carbon source p-Coumaric (C) -4.7 -6.9 N.D. -0.5 -0.7
carbon source benzoic (C) -5.3 -6.7 N.D. -0.0 -0.5
carbon source 1,2-Propanediol (C) -5.5 -6.4 N.D. -0.1 -0.6
carbon source Protocatechuic Acid (C) -4.9 -7.1 N.D. -0.3 -0.3
nitrogen source nitrite (N) -5.3 -6.5 N.D. -0.5 -0.1
carbon source Trisodium citrate (C) -3.4 -7.3 N.D. +0.3 -2.0
carbon source 1,5-Pentanediol (C) -5.8 -6.8 N.D. +0.1 +0.0
carbon source 1,5-Pentanediol (C) -5.4 -7.0 N.D. -0.1 +0.0
carbon source Beta-alanine (C) -5.7 -7.0 N.D. -0.1 +0.4
carbon source Vanillin (C) -5.0 -7.9 N.D. +0.1 +0.5
carbon source Hydroxy-L-Proline (C) -5.4 -6.4 N.D. +0.1 -0.7
carbon source 3-Hydroxypropionate (C) -5.0 -7.6 N.D. +0.3 +0.1
nitrogen source Beta-alanine (N) -5.2 -7.1 N.D. +0.1 -0.1
temperature shift Temperature shift 30_to_25 -4.9 -7.0 N.D. +0.2 -0.4
carbon source Hydroxy-L-Proline (C) -5.2 -7.9 N.D. +0.2 +0.7
carbon source Delta-Dodecalactone (C) -4.3 -7.3 N.D. +0.3 -0.8
carbon source Beta-alanine (C) -5.2 -7.2 N.D. +0.4 +0.0
carbon source Protocatechuic Acid (C) -4.5 -7.8 N.D. +0.4 -0.1
carbon source p-Coumaric (C) -5.4 -6.9 N.D. +0.1 +0.2
temperature shift Temperature shift 30_to_25; with MOPS -4.8 -6.9 N.D. +0.6 -0.8
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