Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_0420 and PP_0421 are separated by 9 nucleotidesPP_0421 and PP_0422 overlap by 4 nucleotidesPP_0422 and PP_0423 are separated by 147 nucleotidesPP_0423 and PP_0424 overlap by 4 nucleotides PP_0420: PP_0420 - aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex, at 509,378 to 509,971 _0420 PP_0421: PP_0421 - Anthranilate phosphoribosyltransferase, at 509,981 to 511,030 _0421 PP_0422: PP_0422 - Indole-3-glycerol phosphate synthase, at 511,027 to 511,860 _0422 PP_0423: PP_0423 - conserved protein of unknown function, at 512,008 to 512,712 _0423 PP_0424: PP_0424 - DNA-binding transcriptional dual regulator, at 512,709 to 513,353 _0424
Group Condition PP_0420 PP_0421 PP_0422 PP_0423 PP_0424
carbon source Hydroxy-L-Proline (C) -7.1 -5.2 -7.9 N.D. +0.2
carbon source Vanillic Acid (C) -6.8 -5.2 -8.0 N.D. +0.1
nitrogen source nitrite (N) -7.4 -5.3 -6.5 N.D. -0.5
phage FRSphage -7.4 -5.3 -6.8 N.D. -0.0
carbon source Protocatechuic Acid (C) -6.9 -4.9 -7.1 N.D. -0.3
nitrogen source nitrogen source Ammonium chloride 20mM -7.2 -5.0 -6.8 N.D. +0.0
carbon source Phenylacetic (C) -7.1 -4.8 -7.0 N.D. -0.1
carbon source benzoic (C) -6.7 -5.3 -6.7 N.D. -0.0
carbon source Ferulic Acid (C) -6.6 -5.1 -7.1 N.D. +0.1
carbon source p-Coumaric (C) -6.4 -5.4 -6.9 N.D. +0.1
carbon source Vanillin (C) -5.7 -5.0 -7.9 N.D. +0.1
carbon source Vanillin (C) -6.2 -5.3 -7.2 N.D. +0.1
carbon source Protocatechuic Acid (C) -6.5 -4.5 -7.8 N.D. +0.4
nitrogen source Beta-alanine (N) -6.1 -5.2 -7.1 N.D. +0.1
carbon source p-Coumaric (C) -6.9 -4.9 -6.1 N.D. -0.3
carbon source Vanillic Acid (C) -6.6 -5.1 -6.5 N.D. +0.0
carbon source Ferulic Acid (C) -6.8 -5.5 -5.8 N.D. +0.0
nitrogen source nitrite (N) -7.4 -4.4 -6.0 N.D. -0.1
carbon source Protocatechuic Acid (C) -6.3 -5.0 -6.8 N.D. +0.2
carbon source Phenylacetic (C) -6.4 -4.8 -6.6 N.D. +0.0
carbon source Protocatechuic Acid (C) -6.8 -5.2 -5.8 N.D. +0.1
nitrogen source L-Lysine (N) -6.5 -4.8 -6.3 N.D. -0.1
nitrogen source Beta-alanine (N) -6.2 -4.7 -6.8 N.D. -0.2
nitrogen source D-Lysine (N) -5.9 -5.3 -6.4 N.D. -0.1
phage FRSphage -6.6 -4.8 -6.3 N.D. -0.0
temperature shift Temperature shift 30_to_25; with MOPS -6.7 -4.1 -6.9 N.D. +0.1
no phage control no phage control -5.8 -4.8 -7.1 N.D. +0.1
carbon source 4-Hydroxybenzoic Acid (C) -6.4 -4.5 -6.5 N.D. -0.2
temperature shift Temperature shift 30_to_25; with MOPS -6.0 -4.8 -6.9 N.D. +0.6
carbon source benzoic (C) -5.8 -4.6 -6.9 N.D. +0.2
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