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Fitness for 5 genes in
Pseudomonas putida KT2440
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500 nt
PP_0417 and PP_0418 are separated by 132 nucleotides
PP_0418 and PP_0420 are separated by 367 nucleotides
PP_0420 and PP_0421 are separated by 9 nucleotides
PP_0421 and PP_0422 overlap by 4 nucleotides
PP_0417: PP_0417 - Anthranilate synthase component 1, at 505,507 to 506,988
_0417
PP_0418: PP_0418 - Esterase EstP, at 507,121 to 509,010
_0418
PP_0420: PP_0420 - aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex, at 509,378 to 509,971
_0420
PP_0421: PP_0421 - Anthranilate phosphoribosyltransferase, at 509,981 to 511,030
_0421
PP_0422: PP_0422 - Indole-3-glycerol phosphate synthase, at 511,027 to 511,860
_0422
Group
Condition
PP
_0417
PP
_0418
PP
_0420
PP
_0421
PP
_0422
carbon source
Hydroxy-L-Proline (C)
-6.7
+0.0
-7.1
-5.2
-7.9
carbon source
Vanillic Acid (C)
-6.1
+0.2
-6.8
-5.2
-8.0
nitrogen source
nitrite (N)
-6.1
-0.0
-7.4
-5.3
-6.5
carbon source
Phenylacetic (C)
-6.2
-0.0
-7.1
-4.8
-7.0
nitrogen source
nitrogen source Ammonium chloride 20mM
-6.0
+0.0
-7.2
-5.0
-6.8
carbon source
p-Coumaric (C)
-6.3
-0.0
-6.4
-5.4
-6.9
carbon source
Protocatechuic Acid (C)
-6.2
+0.0
-6.5
-4.5
-7.8
carbon source
Vanillin (C)
-6.1
-0.0
-5.7
-5.0
-7.9
carbon source
Protocatechuic Acid (C)
-5.9
+0.0
-6.9
-4.9
-7.1
carbon source
Ferulic Acid (C)
-6.6
-0.0
-6.8
-5.5
-5.8
carbon source
Ferulic Acid (C)
-5.9
+0.1
-6.6
-5.1
-7.1
carbon source
Vanillic Acid (C)
-6.1
-0.0
-6.6
-5.1
-6.5
nitrogen source
Beta-alanine (N)
-5.9
-0.0
-6.1
-5.2
-7.1
carbon source
Protocatechuic Acid (C)
-6.2
+0.0
-6.3
-5.0
-6.8
carbon source
benzoic (C)
-5.5
-0.0
-6.7
-5.3
-6.7
carbon source
Vanillin (C)
-5.6
+0.0
-6.2
-5.3
-7.2
carbon source
p-Coumaric (C)
-6.3
-0.0
-6.9
-4.9
-6.1
carbon source
Phenylacetic (C)
-6.3
+0.1
-6.4
-4.8
-6.6
carbon source
Protocatechuic Acid (C)
-6.1
+0.0
-6.8
-5.2
-5.8
carbon source
Hydroxy-L-Proline (C)
-6.6
+0.0
-5.6
-5.4
-6.4
carbon source
4-Hydroxybenzoic Acid (C)
-6.3
+0.1
-6.4
-4.5
-6.5
nitrogen source
Beta-alanine (N)
-5.9
-0.0
-6.2
-4.7
-6.8
nitrogen source
nitrite (N)
-5.6
-0.0
-7.4
-4.4
-6.0
carbon source
L-Lysine (C)
-6.3
-0.1
-2.1
-6.9
-7.9
carbon source
benzoic (C)
-5.9
+0.0
-5.8
-4.6
-6.9
nitrogen source
Propandiamine (N)
-5.9
+0.0
-6.3
-4.7
-6.3
nitrogen source
L-Lysine (N)
-5.4
-0.0
-6.5
-4.8
-6.3
carbon source
1,2-Propanediol (C)
-5.9
-0.0
-5.2
-5.5
-6.4
carbon source
D-Galacturonic Acid (C)
-6.2
-0.1
-5.5
-5.1
-6.3
carbon source
D-Galacturonic Acid (C)
-5.8
+0.1
-5.9
-5.0
-6.3
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