Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_0415 and PP_0416 overlap by 4 nucleotidesPP_0416 and PP_0417 are separated by 69 nucleotidesPP_0417 and PP_0418 are separated by 132 nucleotidesPP_0418 and PP_0420 are separated by 367 nucleotides PP_0415: PP_0415 - ribulose-5-phosphate 3-epimerase, at 503,948 to 504,622 _0415 PP_0416: PP_0416 - Phosphoglycolate phosphatase, at 504,619 to 505,437 _0416 PP_0417: PP_0417 - Anthranilate synthase component 1, at 505,507 to 506,988 _0417 PP_0418: PP_0418 - Esterase EstP, at 507,121 to 509,010 _0418 PP_0420: PP_0420 - aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex, at 509,378 to 509,971 _0420
Group Condition PP_0415 PP_0416 PP_0417 PP_0418 PP_0420
carbon source Hydroxy-L-Proline (C) N.D. -0.1 -6.7 +0.0 -7.1
nitrogen source nitrite (N) N.D. -0.3 -6.1 -0.0 -7.4
carbon source Phenylacetic (C) N.D. -0.3 -6.2 -0.0 -7.1
carbon source Ferulic Acid (C) N.D. -0.1 -6.6 -0.0 -6.8
nitrogen source nitrite (N) N.D. -0.2 -5.6 -0.0 -7.4
carbon source p-Coumaric (C) N.D. +0.1 -6.3 -0.0 -6.9
nitrogen source nitrogen source Ammonium chloride 20mM N.D. +0.2 -6.0 +0.0 -7.2
carbon source Protocatechuic Acid (C) N.D. +0.1 -6.1 +0.0 -6.8
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.3 -5.5 -0.0 -7.0
carbon source Phenylacetic (C) N.D. -0.1 -6.3 +0.1 -6.4
carbon source Protocatechuic Acid (C) N.D. -0.1 -6.2 +0.0 -6.5
carbon source Vanillic Acid (C) N.D. -0.0 -6.1 +0.2 -6.8
carbon source Protocatechuic Acid (C) N.D. +0.2 -5.9 +0.0 -6.9
carbon source Ferulic Acid (C) N.D. -0.2 -5.9 +0.1 -6.6
carbon source Vanillic Acid (C) N.D. +0.3 -6.1 -0.0 -6.6
carbon source Protocatechuic Acid (C) N.D. +0.1 -6.2 +0.0 -6.3
carbon source p-Coumaric (C) N.D. +0.3 -6.3 -0.0 -6.4
nitrogen source L-Arginine (N) N.D. -0.3 -5.6 -0.0 -6.4
nitrogen source Beta-alanine (N) N.D. -0.2 -5.9 -0.0 -6.2
carbon source benzoic (C) N.D. -0.1 -5.5 -0.0 -6.7
nitrogen source L-Lysine (N) N.D. -0.3 -5.4 -0.0 -6.5
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.4 -6.3 +0.1 -6.4
temperature shift Temperature shift 30_to_25; with MOPS N.D. -0.4 -5.1 +0.0 -6.7
nitrogen source Beta-alanine (N) N.D. -0.1 -5.9 -0.0 -6.1
nitrogen source Propandiamine (N) N.D. +0.1 -5.9 +0.0 -6.3
carbon source Vanillin (C) N.D. -0.0 -6.1 -0.0 -5.7
carbon source Hydroxy-L-Proline (C) N.D. +0.3 -6.6 +0.0 -5.6
carbon source Vanillin (C) N.D. -0.0 -5.6 +0.0 -6.2
carbon source benzoic (C) N.D. +0.3 -5.9 +0.0 -5.8
nitrogen source Hippuric (N) N.D. +0.2 -5.7 +0.2 -6.1
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