Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_0376 and PP_0377 are separated by 1 nucleotidesPP_0377 and PP_0378 overlap by 4 nucleotidesPP_0378 and PP_0379 are separated by 163 nucleotidesPP_0379 and PP_0380 are separated by 78 nucleotides PP_0376: PP_0376 - Coenzyme PQQ synthesis protein E, at 456,620 to 457,750 _0376 PP_0377: PP_0377 - coenzyme PQQ synthesis protein D, at 457,752 to 458,027 _0377 PP_0378: PP_0378 - Pyrroloquinoline-quinone synthase, at 458,024 to 458,779 _0378 PP_0379: PP_0379 - Coenzyme PQQ synthesis protein B, at 458,943 to 459,854 _0379 PP_0380: PP_0380 - Coenzyme PQQ synthesis protein A, at 459,933 to 460,004 _0380
Group Condition PP_0376 PP_0377 PP_0378 PP_0379 PP_0380
carbon source 2-methyl-1-butanol (C) -6.1 -4.2 -3.8 -3.7 -1.7
carbon source Ethyl decanoate (C) -5.7 -4.1 -5.4 -2.7 -0.8
carbon source Ethyl decanoate (C) -5.3 -4.1 -5.1 -2.6 -1.2
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) -5.3 -3.7 -5.1 -3.0 -0.8
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -3.8 -2.8 -4.2 -4.1 -1.9
carbon source 2-methyl-1-butanol (C) -4.7 -3.0 -3.7 -3.1 -1.6
carbon source 1,3-Hexanediol (C) -4.3 -3.3 -4.8 -3.2 -0.4
carbon source 3-methyl-3-buten-1-ol 0.25 vol% (C) -4.4 -3.6 -4.6 -2.1 -0.6
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -4.0 -1.7 -4.2 -3.3 -2.0
carbon source 1,3-Hexanediol (C) -4.3 -3.4 -4.0 -3.1 -0.3
carbon source 3-methyl-1-butanol 0.1 vol% (C) -4.7 -2.5 -4.2 -2.2 -0.8
carbon source 1,5-Pentanediol (C) -3.3 -3.2 -3.0 -2.5 -1.5
carbon source 1,5-Pentanediol (C) -2.8 -3.4 -3.6 -2.9 -0.9
carbon source 3-methyl-3-butenol (C) -3.2 -4.5 -2.4 -1.9 -1.0
carbon source 1-Pentanol (C) -2.7 -4.2 -3.3 -1.9 -0.9
carbon source 3-methyl-1-butanol 0.25 vol% (C) -3.2 -2.7 -3.3 -1.2 -1.8
carbon source 1-Pentanol (C) -3.2 -2.5 -2.8 -2.3 -0.8
carbon source 1-Pentanol (C) -2.8 -1.6 -3.1 -2.5 -1.2
carbon source 1,4-Butanediol (C) -2.1 -2.9 -2.2 -1.7 -0.9
stress Growth with Chloride 500 mM -2.2 -2.5 -2.3 -1.7 -0.6
carbon source 3-Hydroxyhexanoic (C) -2.6 -1.7 -2.1 -1.9 -0.7
stress Growth with Chloride 500 mM -2.0 -1.4 -2.4 -2.1 -1.0
stress Growth with Chloride 500 mM -2.2 -2.1 -2.2 -2.2 -0.2
carbon source 3-methyl-3-butenol (C) -2.3 -1.8 -2.6 -1.3 -0.6
carbon source 1,4-Butanediol (C) -2.3 -1.1 -2.1 -2.2 -0.7
nitrogen source Propandiamine (N) -1.2 -4.2 -1.0 -0.8 -1.0
nitrogen source nitrite (N) -1.4 -2.4 -1.9 -1.3 -1.0
nitrogen source Ammonium chloride and TNT (N) -1.7 -1.7 -1.7 -1.4 -1.5
nitrogen source DL-2-Aminobutyric (N) +2.5 +2.4 +2.5 +2.4 +1.9
nitrogen source DL-2-Aminobutyric (N) +2.7 +2.6 +2.6 +2.3 +1.7
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