Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_0373 and PP_5444 are separated by 64 nucleotidesPP_5444 and PP_0375 are separated by 155 nucleotidesPP_0375 and PP_0376 overlap by 35 nucleotidesPP_0376 and PP_0377 are separated by 1 nucleotides PP_0373: PP_0373 - conserved membrane protein of unknown function, at 453,511 to 453,669 _0373 PP_5444: PP_5444 - protein of unknown function, at 453,734 to 454,660 _5444 PP_0375: PP_0375 - Prolyl oligopeptidase family protein, at 454,816 to 456,654 _0375 PP_0376: PP_0376 - Coenzyme PQQ synthesis protein E, at 456,620 to 457,750 _0376 PP_0377: PP_0377 - coenzyme PQQ synthesis protein D, at 457,752 to 458,027 _0377
Group Condition PP_0373 PP_5444 PP_0375 PP_0376 PP_0377
carbon source 2-methyl-1-butanol (C) +0.0 +0.2 +0.1 -6.1 -4.2
carbon source Ethyl decanoate (C) -0.1 +0.3 +0.1 -5.7 -4.1
carbon source Ethyl decanoate (C) -0.1 +0.3 +0.0 -5.3 -4.1
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) +0.3 +0.3 +0.3 -5.3 -3.7
carbon source 3-methyl-3-butenol (C) -0.0 -0.1 -0.0 -3.2 -4.5
carbon source 2-methyl-1-butanol (C) +0.1 +0.1 +0.1 -4.7 -3.0
carbon source 3-methyl-3-buten-1-ol 0.25 vol% (C) +0.1 +0.3 +0.2 -4.4 -3.6
carbon source 1-Pentanol (C) +0.0 -0.1 +0.0 -2.7 -4.2
carbon source 1,3-Hexanediol (C) +0.0 +0.7 +0.0 -4.3 -3.3
carbon source 1,3-Hexanediol (C) +0.2 +0.8 -0.2 -4.3 -3.4
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.0 +0.1 -0.3 -3.8 -2.8
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.2 +0.3 -0.1 -4.7 -2.5
carbon source 1,5-Pentanediol (C) +0.1 +0.2 +0.0 -3.3 -3.2
carbon source 1-Pentanol (C) -0.0 -0.1 +0.0 -3.2 -2.5
carbon source D-Glucose (C) +0.0 -0.0 +0.1 -0.9 -4.8
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.1 +0.0 -0.0 -4.0 -1.7
nitrogen source nitrogen source nitrite 0.5mM -0.1 -0.1 +0.1 -0.7 -4.7
carbon source 1,5-Pentanediol (C) +0.1 +0.4 +0.1 -2.8 -3.4
pH Growth at pH6 and (C) D-Glucose +0.2 +0.1 -0.0 -1.1 -4.8
temperature shift Temperature shift 30_to_25 -0.3 +0.1 +0.0 -0.5 -4.7
nitrogen source Propandiamine (N) -0.0 +0.1 +0.1 -1.2 -4.2
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.3 +0.1 +0.3 -3.2 -2.7
carbon source 1,4-Butanediol (C) -0.1 +0.1 -0.0 -2.1 -2.9
stress Growth with Chloride 200 mM; with MOPS +0.2 +0.0 +0.2 -0.6 -4.7
stress Growth with Chloride 500 mM -0.1 +0.0 -0.0 -2.2 -2.5
carbon source 3-Hydroxyhexanoic (C) -0.3 -0.1 +0.1 -2.6 -1.7
carbon source ferulate (C); with MOPS -0.1 -0.2 -0.1 +0.2 -4.3
stress Growth with Chloride 500 mM -0.1 +0.0 +0.1 -2.2 -2.1
nitrogen source DL-2-Aminobutyric (N) +0.1 +0.2 -0.1 +2.5 +2.4
nitrogen source DL-2-Aminobutyric (N) +0.1 +0.0 +0.0 +2.7 +2.6
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