Fitness for 5 genes in Pseudomonas putida KT2440

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions or try the comparative fitness browser

500 ntPP_0244 and PP_0245 overlap by 1 nucleotidesPP_0245 and PP_0246 overlap by 44 nucleotidesPP_0246 and PP_0247 are separated by 13 nucleotidesPP_0247 and PP_0248 are separated by 97 nucleotides PP_0244: PP_0244 - conserved protein of unknown function, at 298,157 to 298,540 _0244 PP_0245: PP_0245 - putative transcriptional accessory protein, at 298,540 to 301,125 _0245 PP_0246: PP_0246 - two-component system DNA-binding response transcriptional dual regulator, at 301,082 to 301,822 _0246 PP_0247: PP_0247 - Osmolarity sensor protein EnvZ, at 301,836 to 303,149 _0247 PP_0248: PP_0248 - Probable alpha-L-glutamate ligase, at 303,247 to 304,152 _0248
Group Condition PP_0244 PP_0245 PP_0246 PP_0247 PP_0248
nitrogen source Propandiamine (N) -0.1 -0.3 -5.5 -2.2 -0.1
nitrogen source Propandiamine (N) -0.4 -0.5 -2.6 -2.4 -0.3
carbon source Quinic Acid (C) -0.0 -0.1 -5.6 -0.3 +0.0
nitrogen source spermidine (N) +0.3 -0.1 -4.0 -1.8 +0.0
nitrogen source spermidine (N) -0.2 -0.2 -3.3 -1.6 +0.1
carbon source 5-Hydroxydodecanoate (C) -0.5 -0.2 -2.6 -0.3 -0.9
carbon source D-Galacturonic Acid (C) -0.4 +0.2 -3.8 -0.4 -0.1
carbon source 3-Hydroxyhexanoic (C) -0.0 +0.0 -2.7 -1.1 -0.6
pH pH 9 +0.1 +0.1 -4.3 +0.4 -0.4
carbon source 2,3-Butanediol (C) +0.2 -0.2 -2.2 -0.8 -1.0
carbon source 5-Hydroxydodecanoate (C) +0.3 -0.3 -2.3 -0.6 -0.8
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.4 +0.0 -1.5 -0.5 -1.9
carbon source Delta-Nonalactone (C) +0.8 -0.2 -3.0 -0.1 -1.1
carbon source 4-Hydroxyvalerate (C) (40mM) -2.0 +0.5 +1.1 -0.1 -0.7
carbon source 4-Hydroxyvalerate (C) (40mM) -1.6 +0.4 +1.9 -0.1 -0.6
phage P. putida PUT10 MOI 1 -0.5 -0.7 +1.7 +1.2 -0.3
phage P. putida South MOI 10 -0.4 -1.0 +2.3 +1.1 -0.2
phage P. putida South MOI 0.1 -0.3 -0.5 +1.9 +1.2 -0.2
phage P. put South MOI 1 -0.3 -0.5 +1.9 +1.4 -0.4
phage P. putida South MOI 1 -0.2 -0.8 +1.9 +1.5 -0.1
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +0.6 +4.0 -2.4 -0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.0 +0.3 +3.9 -1.4 -0.3
phage P. putida South MOI 10 -0.1 -0.4 +2.2 +1.3 -0.2
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4 +0.2 +4.8 -1.7 +0.0
phage P. putida PUT10 MOI 10 -0.5 -0.6 +2.2 +2.1 -0.3
phage P. put PUT 10 MOI 10 -0.1 -0.5 +2.1 +2.0 -0.5
phage P. put South MOI 1 +0.0 -0.4 +2.2 +1.5 -0.3
phage P. putida South MOI 0.1 +0.1 -0.4 +2.3 +1.2 -0.1
phage P. putida PUT10 MOI 10 -0.5 -0.6 +2.7 +1.9 -0.4
phage P. put PUT 10 MOI 10 -0.1 -0.5 +2.5 +2.0 -0.3
remove
PP_0244
plot		 remove
PP_0245
plot		 remove
PP_0246		 remove
PP_0247
plot		 remove
PP_0248
plot