Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_0243 and PP_0244 are separated by 153 nucleotidesPP_0244 and PP_0245 overlap by 1 nucleotidesPP_0245 and PP_0246 overlap by 44 nucleotidesPP_0246 and PP_0247 are separated by 13 nucleotides PP_0243: PP_0243 - Glutamate--cysteine ligase, at 296,426 to 298,003 _0243 PP_0244: PP_0244 - conserved protein of unknown function, at 298,157 to 298,540 _0244 PP_0245: PP_0245 - putative transcriptional accessory protein, at 298,540 to 301,125 _0245 PP_0246: PP_0246 - two-component system DNA-binding response transcriptional dual regulator, at 301,082 to 301,822 _0246 PP_0247: PP_0247 - Osmolarity sensor protein EnvZ, at 301,836 to 303,149 _0247
Group Condition PP_0243 PP_0244 PP_0245 PP_0246 PP_0247
nitrogen source Propandiamine (N) N.D. -0.1 -0.3 -5.5 -2.2
carbon source Quinic Acid (C) N.D. -0.0 -0.1 -5.6 -0.3
nitrogen source Propandiamine (N) N.D. -0.4 -0.5 -2.6 -2.4
nitrogen source spermidine (N) N.D. +0.3 -0.1 -4.0 -1.8
nitrogen source spermidine (N) N.D. -0.2 -0.2 -3.3 -1.6
carbon source D-Galacturonic Acid (C) N.D. -0.4 +0.2 -3.8 -0.4
pH pH 9 N.D. +0.1 +0.1 -4.3 +0.4
carbon source 3-Hydroxyhexanoic (C) N.D. -0.0 +0.0 -2.7 -1.1
carbon source 5-Hydroxydodecanoate (C) N.D. -0.5 -0.2 -2.6 -0.3
carbon source Delta-Nonalactone (C) N.D. +0.8 -0.2 -3.0 -0.1
carbon source 4-Hydroxyvalerate (C) (40mM) N.D. -2.0 +0.5 +1.1 -0.1
carbon source 4-Hydroxyvalerate (C) (40mM) N.D. -1.6 +0.4 +1.9 -0.1
phage P. put South MOI 0.1 N.D. -0.4 -0.6 +1.4 +1.1
phage P. putida PUT10 MOI 1 N.D. -0.5 -0.7 +1.7 +1.2
phage P. put South MOI 0.1 N.D. -0.7 -0.3 +1.5 +1.2
phage P. put PUT 10 MOI 0.1 N.D. -0.2 -0.6 +1.9 +0.9
phage P. putida South MOI 10 N.D. -0.4 -1.0 +2.3 +1.1
phage P. putida South MOI 0.1 N.D. -0.3 -0.5 +1.9 +1.2
phage P. putida South MOI 1 N.D. -0.2 -0.8 +1.9 +1.5
phage P. put South MOI 1 N.D. -0.3 -0.5 +1.9 +1.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X N.D. +0.5 +0.6 +4.0 -2.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X N.D. -0.0 +0.3 +3.9 -1.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X N.D. -0.4 +0.2 +4.8 -1.7
phage P. putida South MOI 10 N.D. -0.1 -0.4 +2.2 +1.3
phage P. putida PUT10 MOI 10 N.D. -0.5 -0.6 +2.2 +2.1
phage P. putida South MOI 0.1 N.D. +0.1 -0.4 +2.3 +1.2
phage P. put South MOI 1 N.D. +0.0 -0.4 +2.2 +1.5
phage P. put PUT 10 MOI 10 N.D. -0.1 -0.5 +2.1 +2.0
phage P. putida PUT10 MOI 10 N.D. -0.5 -0.6 +2.7 +1.9
phage P. put PUT 10 MOI 10 N.D. -0.1 -0.5 +2.5 +2.0
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