Fitness for 5 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0165	PP_0166	PP_0167	PP_5429	PP_5430
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-4.2	-3.6	-3.9	-2.6	+0.5
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-3.7	-3.8	-3.9	-1.7	+0.1
stress	Growth with Chloride 500 mM; with MOPS	-3.4	-3.1	-3.2	-1.4	-1.7
stress	Growth with Chloride 500 mM; with MOPS	-3.6	-3.3	-3.0	-1.4	-1.3
stress	Growth with Chloride 500 mM; with MOPS	-3.5	-3.7	-3.5	-1.4	-0.2
stress	Growth with Chloride 500 mM; with MOPS	-3.1	-2.9	-3.1	-2.2	-0.9
stress	Growth with Chloride 500 mM; with MOPS	-3.5	-3.1	-3.4	-1.0	-1.2
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-3.1	-3.6	-3.4	-1.3	-0.2
micoeukaryotes	C.elegans, mixed culture-2	-2.8	-3.2	-3.1	-1.6	-0.5
micoeukaryotes	Dictyostellum sp.mixed culture-1	-3.2	-3.2	-2.9	-1.3	-0.6
stress	Growth with Chloride 500 mM; with MOPS	-3.5	-2.8	-3.3	-1.3	-0.1
carbon source	ferulate (C); with MOPS	-2.6	-2.1	-2.4	-1.9	-2.0
carbon source	ferulate (C); with MOPS	-2.5	-2.3	-2.2	-1.4	-1.9
micoeukaryotes	Dictyostellum sp.mixed culture-2	-3.0	-2.9	-2.8	-1.0	-0.3
stress	Growth with Chloride 500 mM	-2.7	-2.5	-2.6	-1.3	-0.7
biofilm mediium pdms	biofilm mediium PDMS; 24 hours	-2.8	-2.9	-2.8	-0.4	-0.5
biofilm mediium pdms	biofilm mediium PDMS; 24 hours	-2.8	-2.9	-3.0	-0.4	-0.2
micoeukaryotes	C.elegans, mixed culture-1	-2.6	-2.7	-2.9	-0.8	+0.0
stress	Growth with Chloride 500 mM	-2.3	-2.4	-2.2	-1.0	-1.0
micoeukaryotes	Acanthamoeba sp., muxed culture-1	-2.2	-2.7	-2.6	-0.9	-0.3
nitrogen source	L-Leucine (N)	+2.4	+2.7	+2.7	+1.1	+0.6
temperature shift	Temperature shift 10_to_30	+2.9	+3.5	+3.5	-0.0	-0.2
nitrogen source	DL-2-Aminobutyric (N)	+2.4	+2.9	+2.9	+1.2	+0.3
nitrogen source	DL-2-Aminobutyric (N)	+2.5	+3.1	+2.9	+1.5	+0.8
carbon source	carbon source Bisabolol 45 mM	+2.5	+3.0	+2.8	+1.8	+1.0
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+3.3	+3.3	+3.3	+1.5	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+3.1	+3.3	+3.3	+1.0	+0.8
carbon source	Delta-Decalactone (C)	+3.4	+3.5	+3.5	+1.7	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+3.3	+3.5	+3.6	+1.7	+0.7
carbon source	Delta-Decalactone (C)	+4.5	+4.8	+4.8	+2.2	+0.7