Fitness for 5 genes in Pseudomonas putida KT2440

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500 ntPP_0138 and PP_0139 overlap by 19 nucleotidesPP_0139 and PP_0140 overlap by 4 nucleotidesPP_0140 and PP_0141 are separated by 3 nucleotidesPP_0141 and PP_0142 overlap by 4 nucleotides PP_0138: PP_0138 - conserved membrane protein of unknown function, at 146,243 to 147,472 _0138 PP_0139: PP_0139 - putative Lipoprotein, at 147,454 to 148,089 _0139 PP_0140: PP_0140 - conserved protein of unknown function, at 148,086 to 149,024 _0140 PP_0141: PP_0141 - putative ABC transporter, ATP-binding protein, at 149,028 to 149,819 _0141 PP_0142: PP_0142 - putative ABC transporter, permease protein, at 149,816 to 150,949 _0142
Group Condition PP_0138 PP_0139 PP_0140 PP_0141 PP_0142
carbon source ferulate (C); with MOPS -3.1 -0.2 -0.1 -0.1 +0.1
temperature shift Temperature shift 10_to_25; with MOPS -0.8 -0.8 -0.3 -0.6 -0.3
carbon source ferulate (C); with MOPS -2.5 -0.1 -0.0 -0.0 -0.1
carbon source D-Glucose (C) -0.9 -0.7 -0.1 -0.8 +0.3
carbon source D-Glucose (C) -1.4 -0.5 +0.2 +0.5 -0.1
carbon source ferulate (C); with MOPS -1.9 +0.4 +0.0 +0.7 -0.2
pH Growth at pH6 and (C) D-Glucose -1.1 +0.4 -0.4 +0.5 -0.2
pH Growth at pH7 and (C) D-Glucose -1.2 -0.1 +0.4 +0.8 +0.4
stress R2A with Fusaric 240 ug/mL +1.9 +0.2 -0.4 -0.3 -0.1
r2a control with 0.2% methanol R2A control with 0.2% methanol +2.1 +0.0 -0.0 -0.3 -0.2
carbon source Butyl stearate (C) +2.1 -0.2 -0.1 -0.3 +0.1
carbon source butyrate (C) +1.7 -0.4 +0.2 +0.4 -0.2
carbon source D-Glucose (C) 1.25 mM +2.6 -0.6 +0.2 -0.1 -0.1
carbon source D-Lysine 10 mM (C) +2.8 +0.2 +0.2 -0.3 -0.6
carbon source D-Glucose (C) 5 mM +2.7 -0.3 +0.2 -0.2 -0.1
carbon source 5-Aminovaleric 10 mM (C) +2.4 -0.0 -0.1 +0.5 -0.3
carbon source Valerolactam 10 mM (C) +2.5 +0.1 -0.1 +0.2 -0.3
carbon source Hexanoic (C) +2.9 -0.4 +0.2 -0.2 +0.0
carbon source D-Lysine 10 mM (C) +3.0 -0.1 -0.1 +0.0 -0.0
carbon source 4-Aminobutyric 10 mM (C) +2.8 -0.1 +0.4 +0.1 -0.3
carbon source Ethanol (C) +3.1 -0.1 -0.0 -0.1 +0.0
carbon source D-Glucose (C) 2.5 mM +3.3 -0.0 -0.1 -0.2 +0.0
carbon source 5-Aminovaleric 10 mM (C) +2.8 +0.1 +0.1 -0.2 +0.3
carbon source Butanol (C) +3.0 -0.3 +0.2 +0.2 +0.1
phage P. putida PUT 7 MOI 1 +0.5 +0.6 +0.6 +0.7 +0.9
carbon source Valeric (C) +3.0 -0.2 +0.1 +0.5 -0.0
carbon source D-Fructose (C) +3.4 -0.3 +0.2 +0.2 +0.2
carbon source L-Glutamic (C) +1.0 +0.7 +0.9 +0.4 +0.8
phage P. putida Missley MOI 0.1 +1.0 +0.6 +0.8 +0.5 +1.0
carbon source D-Glucose (C) 10 mM +3.7 -0.2 +0.0 +0.3 +0.1
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