Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas putida KT2440
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 989 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
PP_0138 and PP_0139 overlap by 19 nucleotides
PP_0139 and PP_0140 overlap by 4 nucleotides
PP_0140 and PP_0141 are separated by 3 nucleotides
PP_0141 and PP_0142 overlap by 4 nucleotides
PP_0138: PP_0138 - conserved membrane protein of unknown function, at 146,243 to 147,472
_0138
PP_0139: PP_0139 - putative Lipoprotein, at 147,454 to 148,089
_0139
PP_0140: PP_0140 - conserved protein of unknown function, at 148,086 to 149,024
_0140
PP_0141: PP_0141 - putative ABC transporter, ATP-binding protein, at 149,028 to 149,819
_0141
PP_0142: PP_0142 - putative ABC transporter, permease protein, at 149,816 to 150,949
_0142
Group
Condition
PP
_0138
PP
_0139
PP
_0140
PP
_0141
PP
_0142
carbon source
ferulate (C); with MOPS
-3.1
-0.2
-0.1
-0.1
+0.1
temperature shift
Temperature shift 10_to_25; with MOPS
-0.8
-0.8
-0.3
-0.6
-0.3
carbon source
ferulate (C); with MOPS
-2.5
-0.1
-0.0
-0.0
-0.1
carbon source
D-Glucose (C)
-0.9
-0.7
-0.1
-0.8
+0.3
carbon source
D-Glucose (C)
-1.4
-0.5
+0.2
+0.5
-0.1
carbon source
ferulate (C); with MOPS
-1.9
+0.4
+0.0
+0.7
-0.2
pH
Growth at pH6 and (C) D-Glucose
-1.1
+0.4
-0.4
+0.5
-0.2
pH
Growth at pH7 and (C) D-Glucose
-1.2
-0.1
+0.4
+0.8
+0.4
stress
R2A with Fusaric 240 ug/mL
+1.9
+0.2
-0.4
-0.3
-0.1
r2a control with 0.2% methanol
R2A control with 0.2% methanol
+2.1
+0.0
-0.0
-0.3
-0.2
carbon source
Butyl stearate (C)
+2.1
-0.2
-0.1
-0.3
+0.1
carbon source
butyrate (C)
+1.7
-0.4
+0.2
+0.4
-0.2
carbon source
D-Glucose (C) 1.25 mM
+2.6
-0.6
+0.2
-0.1
-0.1
carbon source
D-Lysine 10 mM (C)
+2.8
+0.2
+0.2
-0.3
-0.6
carbon source
D-Glucose (C) 5 mM
+2.7
-0.3
+0.2
-0.2
-0.1
carbon source
5-Aminovaleric 10 mM (C)
+2.4
-0.0
-0.1
+0.5
-0.3
carbon source
Valerolactam 10 mM (C)
+2.5
+0.1
-0.1
+0.2
-0.3
carbon source
Hexanoic (C)
+2.9
-0.4
+0.2
-0.2
+0.0
carbon source
D-Lysine 10 mM (C)
+3.0
-0.1
-0.1
+0.0
-0.0
carbon source
4-Aminobutyric 10 mM (C)
+2.8
-0.1
+0.4
+0.1
-0.3
carbon source
Ethanol (C)
+3.1
-0.1
-0.0
-0.1
+0.0
carbon source
D-Glucose (C) 2.5 mM
+3.3
-0.0
-0.1
-0.2
+0.0
carbon source
5-Aminovaleric 10 mM (C)
+2.8
+0.1
+0.1
-0.2
+0.3
carbon source
Butanol (C)
+3.0
-0.3
+0.2
+0.2
+0.1
phage
P. putida PUT 7 MOI 1
+0.5
+0.6
+0.6
+0.7
+0.9
carbon source
Valeric (C)
+3.0
-0.2
+0.1
+0.5
-0.0
carbon source
D-Fructose (C)
+3.4
-0.3
+0.2
+0.2
+0.2
carbon source
L-Glutamic (C)
+1.0
+0.7
+0.9
+0.4
+0.8
phage
P. putida Missley MOI 0.1
+1.0
+0.6
+0.8
+0.5
+1.0
carbon source
D-Glucose (C) 10 mM
+3.7
-0.2
+0.0
+0.3
+0.1
remove
PP_0138
plot
remove
PP_0139
plot
remove
PP_0140
remove
PP_0141
plot
remove
PP_0142
plot