Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_05245 and PFR28_05246 are separated by 149 nucleotidesPFR28_05246 and PFR28_05247 are separated by 96 nucleotidesPFR28_05247 and PFR28_05248 are separated by 1 nucleotidesPFR28_05248 and PFR28_05249 are separated by 192 nucleotides PFR28_05245: PFR28_05245 - hypothetical protein, at 6,005,518 to 6,005,901 _05245 PFR28_05246: PFR28_05246 - hypothetical protein, at 6,006,051 to 6,006,248 _05246 PFR28_05247: PFR28_05247 - Bicyclomycin resistance protein, at 6,006,345 to 6,007,538 _05247 PFR28_05248: PFR28_05248 - hypothetical protein, at 6,007,540 to 6,007,710 _05248 PFR28_05249: PFR28_05249 - Zinc-type alcohol dehydrogenase-like protein, at 6,007,903 to 6,008,916 _05249
Group Condition PFR28_05245 PFR28_05246 PFR28_05247 PFR28_05248 PFR28_05249
carbon source Guanosine (C) -0.5 -1.0 +0.0 N.D. -0.8
stress D-Glucose (C); with Chloride 200 mM -0.2 -1.5 +0.1 N.D. -0.1
carbon source L-Phenylalanine carbon 5 mM -0.3 -1.1 -0.1 N.D. -0.2
carbon source octanoate (C) -0.2 -1.6 +0.4 N.D. -0.2
carbon source Glycocyamine 20 mM (C) +0.1 -0.5 -0.3 N.D. -0.8
carbon source L-Lactate (C) 10 mM -0.2 -0.7 -0.2 N.D. -0.3
carbon source L-Lactate (C) 10 mM -0.3 -1.0 -0.0 N.D. -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.0 +0.3 -0.5 N.D. -1.1
carbon source L-Arabinose (C) 10 mM -0.0 -1.5 -0.0 N.D. +0.2
carbon source Inosine (C) -0.4 -0.8 -0.1 N.D. +0.2
carbon source L-Valine (C) 10 mM +0.1 -1.1 +0.2 N.D. -0.2
carbon source L-Lactate (C) +0.3 -0.6 -0.1 N.D. -0.5
carbon source Cytidine (C) +0.0 +0.3 -0.3 N.D. -0.9
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +0.3 -0.2 -0.7 N.D. -0.2
carbon source butyrate (C) 10 mM -0.3 -0.9 +0.5 N.D. -0.0
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +0.2 +0.2 -0.9 N.D. -0.1
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM -0.5 -0.6 +0.1 N.D. +0.5
carbon source L-Glutamic carbon 10 mM -0.6 +0.8 -0.3 N.D. -0.3
carbon source Glycerol carbon 20 mM -0.3 +0.7 -0.2 N.D. -0.3
carbon source L-Valine (C) 10 mM -0.3 -0.5 +0.2 N.D. +0.5
carbon source D-Ribose carbon 10 mM -0.4 +1.2 -0.4 N.D. -0.3
carbon source D-(+)-Galactosamine (C) 10 mM +0.7 -0.7 -0.0 N.D. +0.2
carbon source Betaine (C) 2.5 mM -0.1 +0.9 +0.3 N.D. -0.4
carbon source D,L-Malic Acid (C) +0.3 +0.6 -0.3 N.D. +0.1
carbon source L-tyrosine (C) 10 mM -0.2 +0.9 +0.3 N.D. +0.0
carbon source trans-aconitic (C) 5 mM -0.2 +0.8 +0.2 N.D. +0.5
carbon source D-Xylose (C) 10 mM +0.5 +0.4 -0.0 N.D. +0.5
carbon source trans-aconitic (C) +0.4 +0.8 -0.1 N.D. +0.3
carbon source D-(+)-Galactosamine (C) 10 mM +0.7 +0.5 -0.2 N.D. +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.6 +1.5 +0.6 N.D. +0.2
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