Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_05127 and PFR28_05128 are separated by 187 nucleotidesPFR28_05128 and PFR28_05129 are separated by 177 nucleotidesPFR28_05129 and PFR28_05130 are separated by 225 nucleotidesPFR28_05130 and PFR28_05131 overlap by 4 nucleotides PFR28_05127: PFR28_05127 - hypothetical protein, at 5,872,873 to 5,874,876 _05127 PFR28_05128: PFR28_05128 - tRNA-Leu, at 5,875,064 to 5,875,150 _05128 PFR28_05129: PFR28_05129 - tRNA-Leu, at 5,875,328 to 5,875,414 _05129 PFR28_05130: PFR28_05130 - Ribonuclease R, at 5,875,640 to 5,878,240 _05130 PFR28_05131: PFR28_05131 - '23S rRNA (guanosine-2'-O-)-methyltransferase RlmB' transl_table=11, at 5,878,237 to 5,878,998 _05131
Group Condition PFR28_05127 PFR28_05128 PFR28_05129 PFR28_05130 PFR28_05131
carbon source Ferulic Acid (C) 2.5 mM -0.2 N.D. N.D. -2.1 -0.5
carbon source Ferulic Acid (C) 2.5 mM +0.0 N.D. N.D. -2.4 -0.3
carbon source Ferulic Acid (C) 2.5 mM -0.2 N.D. N.D. -2.3 -0.1
carbon source p-Coumaric (C) 2.5 mM -0.1 N.D. N.D. -2.2 -0.2
carbon source p-Coumaric (C) 2.5 mM -0.2 N.D. N.D. -1.8 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.1 N.D. N.D. -0.8 -1.3
carbon source p-Coumaric (C) 2.5 mM -0.3 N.D. N.D. -1.9 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 N.D. N.D. -1.9 +0.1
carbon source Vanillic Acid (C) 2.5 mM -0.2 N.D. N.D. -0.8 -0.9
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 N.D. N.D. -2.3 +0.6
carbon source L-Phenylalanine carbon 5 mM -0.2 N.D. N.D. -1.0 -0.5
carbon source L-Valine (C) 10 mM -0.1 N.D. N.D. -1.4 -0.1
carbon source octanoate (C) 10 mM -0.3 N.D. N.D. -1.2 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 N.D. N.D. -2.1 +0.8
carbon source octanoate (C) 10 mM -0.1 N.D. N.D. -1.5 +0.3
carbon source L-Valine (C) 10 mM +0.0 N.D. N.D. -1.5 +0.2
carbon source L-Valine (C) 10 mM -0.4 N.D. N.D. -1.1 +0.5
carbon source L-Valine (C) 10 mM -0.0 N.D. N.D. -1.5 +0.6
carbon source Malonic (C) 10 mM -0.1 N.D. N.D. -1.1 +0.4
carbon source Vanillic Acid (C) 2.5 mM -0.4 N.D. N.D. -0.6 +0.6
carbon source L-Valine (C) 10 mM +0.1 N.D. N.D. -0.8 +0.7
carbon source octanoate (C) +0.4 N.D. N.D. -0.7 +0.5
carbon source D-(+)-Galactosamine (C) 10 mM -0.3 N.D. N.D. +0.8 +0.5
carbon source propionate carbon 20 mM -0.4 N.D. N.D. +1.5 +0.2
carbon source propionate (C) 20 mM -0.1 N.D. N.D. +1.0 +0.4
carbon source L-Carnitine (C) -0.1 N.D. N.D. +0.6 +1.0
carbon source methyl-trans-p-coumarate (C) +0.3 N.D. N.D. +0.1 +1.1
carbon source D-(+)-Galactosamine (C) 10 mM +0.0 N.D. N.D. +1.1 +0.4
carbon source propionate carbon 20 mM -0.1 N.D. N.D. +1.7 +0.0
carbon source propionate carbon 20 mM -0.1 N.D. N.D. +1.6 +0.2
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