Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_05009 and PFR28_05010 overlap by 4 nucleotidesPFR28_05010 and PFR28_05011 overlap by 4 nucleotidesPFR28_05011 and PFR28_05012 are separated by 31 nucleotidesPFR28_05012 and PFR28_05013 are separated by 179 nucleotides PFR28_05009: PFR28_05009 - hypothetical protein, at 5,713,684 to 5,714,307 _05009 PFR28_05010: PFR28_05010 - hypothetical protein, at 5,714,304 to 5,714,849 _05010 PFR28_05011: PFR28_05011 - Type 3 secretion system secretin, at 5,714,846 to 5,716,918 _05011 PFR28_05012: PFR28_05012 - Shikimate kinase 1, at 5,716,950 to 5,717,441 _05012 PFR28_05013: PFR28_05013 - 3-dehydroquinate synthase, at 5,717,621 to 5,718,721 _05013
Group Condition PFR28_05009 PFR28_05010 PFR28_05011 PFR28_05012 PFR28_05013
carbon source 4-Guanidinobutyric (C) -1.0 -0.3 -0.7 N.D. N.D.
carbon source Cytidine (C) -0.4 -0.1 -0.6 N.D. N.D.
carbon source Guanosine (C) -0.9 +0.2 -0.4 N.D. N.D.
carbon source Vanillic Acid (C) 2.5 mM -0.8 +0.1 -0.2 N.D. N.D.
carbon source Cytidine (C) -0.4 -0.2 -0.1 N.D. N.D.
carbon source p-Coumaric (C) -0.7 -0.1 -0.0 N.D. N.D.
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.2 -0.3 -0.3 N.D. N.D.
carbon source D-Ribose (C) 10 mM -0.5 -0.2 -0.0 N.D. N.D.
carbon source L-Lactate (C) -0.5 -0.2 -0.0 N.D. N.D.
carbon source NAG carbon 10 mM -0.5 -0.3 +0.1 N.D. N.D.
carbon source L-Phenylalanine carbon 5 mM -0.4 -0.3 +0.1 N.D. N.D.
carbon source sn-glycero-3-phosphocholine (C) -0.4 -0.3 +0.2 N.D. N.D.
carbon source D-(+)-Galactosamine (C) 10 mM -0.3 +0.1 -0.3 N.D. N.D.
carbon source D,L-Malic Acid (C) -0.6 -0.0 +0.1 N.D. N.D.
carbon source Shikimic Acid carbon 10 mM +0.0 -0.6 +0.2 N.D. N.D.
carbon source L-Phenylalanine carbon 5 mM +0.4 -0.1 -0.2 N.D. N.D.
carbon source D-Xylose (C) 10 mM +0.4 -0.4 +0.1 N.D. N.D.
carbon source Inosine carbon 10 mM +0.6 -0.1 -0.4 N.D. N.D.
carbon source L-Malic (C) 10 mM +0.5 -0.0 -0.2 N.D. N.D.
carbon source Inosine carbon 10 mM +0.4 -0.2 +0.2 N.D. N.D.
carbon source L-Carnitine (C) 10 mM +0.4 -0.1 +0.3 N.D. N.D.
carbon source Xanthosine (C) +0.5 -0.1 +0.2 N.D. N.D.
carbon source Guanosine (C) +0.6 -0.1 +0.2 N.D. N.D.
carbon source butyrate (C) 10 mM +0.5 -0.1 +0.2 N.D. N.D.
carbon source L-Leucine (C) 10 mM +0.3 +0.2 +0.2 N.D. N.D.
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.5 +0.2 +0.0 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.4 +0.3 +0.1 N.D. N.D.
carbon source propionate (C) 20 mM +0.4 +0.3 +0.2 N.D. N.D.
carbon source D,L-Malic Acid (C) 10 mM +0.5 +0.1 +0.2 N.D. N.D.
carbon source D-(+)-Galactosamine (C) 10 mM +0.7 -0.0 +0.2 N.D. N.D.
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