Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04977 and PFR28_04978 are separated by 321 nucleotidesPFR28_04978 and PFR28_04979 are separated by 49 nucleotidesPFR28_04979 and PFR28_04980 are separated by 378 nucleotidesPFR28_04980 and PFR28_04981 are separated by 99 nucleotides PFR28_04977: PFR28_04977 - D-aminoacyl-tRNA deacylase, at 5,677,209 to 5,677,646 _04977 PFR28_04978: PFR28_04978 - Glucans biosynthesis protein G, at 5,677,968 to 5,679,740 _04978 PFR28_04979: PFR28_04979 - Glucans biosynthesis glucosyltransferase H, at 5,679,790 to 5,682,303 _04979 PFR28_04980: PFR28_04980 - Methyl-accepting chemotaxis protein McpQ, at 5,682,682 to 5,684,586 _04980 PFR28_04981: PFR28_04981 - hypothetical protein, at 5,684,686 to 5,685,393 _04981
Group Condition PFR28_04977 PFR28_04978 PFR28_04979 PFR28_04980 PFR28_04981
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -1.0 -2.0 -2.2 -0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.3 -2.4 -2.5 +0.5 N.D.
carbon source L-Valine (C) 10 mM +0.2 +2.1 +2.0 -0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.6 +2.0 +1.8 -0.3 N.D.
carbon source L-Valine (C) 10 mM +0.4 +2.0 +2.1 -0.2 N.D.
carbon source octanoate (C) 10 mM +0.7 +1.9 +2.0 -0.1 N.D.
carbon source D-Ribose (C) 10 mM +0.2 +2.0 +2.0 +0.2 N.D.
carbon source Uridine (C) 10 mM -0.3 +2.3 +2.5 +0.0 N.D.
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.3 +2.3 +2.3 -0.4 N.D.
carbon source octanoate (C) +0.6 +1.9 +2.1 +0.1 N.D.
carbon source Cytidine carbon 10 mM +0.5 +2.1 +2.3 -0.2 N.D.
carbon source D-Ribose (C) 10 mM +0.0 +2.3 +2.3 +0.0 N.D.
carbon source D-Xylose (C) 10 mM +0.2 +2.2 +2.3 -0.0 N.D.
carbon source Cytidine carbon 10 mM +0.4 +2.3 +2.1 -0.1 N.D.
carbon source Cytidine (C) +0.3 +2.1 +2.3 +0.2 N.D.
carbon source octanoate (C) +0.7 +2.2 +2.3 -0.1 N.D.
carbon source octanoate (C) +0.6 +2.5 +2.4 -0.3 N.D.
carbon source D-Xylose (C) 10 mM +0.1 +2.6 +2.6 -0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.6 +2.7 +2.6 -0.4 N.D.
carbon source D-Ribose carbon 10 mM +0.5 +2.4 +2.4 +0.2 N.D.
carbon source D-Xylose (C) 10 mM +0.2 +2.6 +2.8 +0.0 N.D.
carbon source L-Valine (C) 10 mM +0.4 +2.6 +2.7 +0.0 N.D.
carbon source Xanthosine (C) 10 mM -0.0 +2.6 +2.9 +0.2 N.D.
carbon source Uridine (C) 10 mM +0.5 +2.8 +2.7 +0.1 N.D.
carbon source octanoate (C) 10 mM +0.9 +2.6 +2.7 +0.0 N.D.
carbon source Xanthosine (C) 10 mM +0.7 +2.8 +2.9 -0.0 N.D.
carbon source methyl-trans-p-coumarate (C) +1.5 +2.8 +2.9 -0.1 N.D.
carbon source methyl-trans-p-coumarate (C) +1.6 +2.9 +3.2 -0.3 N.D.
carbon source Xanthosine (C) 10 mM +0.5 +3.5 +3.7 +0.0 N.D.
carbon source methyl-trans-p-coumarate (C) +1.3 +3.0 +3.2 +0.3 N.D.
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