Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04972 and PFR28_04973 are separated by 11 nucleotidesPFR28_04973 and PFR28_04974 are separated by 307 nucleotidesPFR28_04974 and PFR28_04975 are separated by 52 nucleotidesPFR28_04975 and PFR28_04976 are separated by 104 nucleotides PFR28_04972: PFR28_04972 - Imidazolonepropionase, at 5,671,900 to 5,673,102 _04972 PFR28_04973: PFR28_04973 - hypothetical protein, at 5,673,114 to 5,673,917 _04973 PFR28_04974: PFR28_04974 - hypothetical protein, at 5,674,225 to 5,675,172 _04974 PFR28_04975: PFR28_04975 - Carboxylesterase NlhH, at 5,675,225 to 5,676,136 _04975 PFR28_04976: PFR28_04976 - Proline iminopeptidase, at 5,676,241 to 5,677,212 _04976
Group Condition PFR28_04972 PFR28_04973 PFR28_04974 PFR28_04975 PFR28_04976
carbon source Cytidine (C) -0.2 -0.5 -0.1 -0.5 -0.0
carbon source Vanillic Acid (C) 2.5 mM -0.6 -0.4 -0.1 +0.2 -0.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.4 -0.2 +0.1 +0.1 -0.5
carbon source p-Coumaric (C) -0.6 +0.2 +0.0 -0.5 +0.1
carbon source Guanosine (C) -0.4 +0.2 -0.1 -0.2 -0.1
carbon source butyrate (C) -0.4 -0.2 +0.3 -0.4 +0.2
carbon source D-Glucosamine Hydrochloride (C) 10 mM -0.1 -0.2 -0.2 -0.4 +0.3
carbon source D,L-Malic Acid (C) 10 mM +0.1 -0.4 +0.1 -0.2 -0.2
carbon source Inosine (C) -0.6 +0.0 -0.1 -0.1 +0.3
carbon source Guanosine (C) -0.4 +0.2 -0.3 -0.2 +0.2
carbon source octanoate (C) -0.7 -0.2 +0.2 +0.0 +0.3
carbon source caffeic (C) -0.5 -0.1 -0.1 +0.0 +0.4
carbon source L-Lysine (C) 10 mM -0.0 -0.2 +0.1 -0.4 +0.3
carbon source Vanillic Acid (C) 2.5 mM -0.1 -0.4 -0.1 +0.3 +0.2
carbon source Fumarate (C) 20 mM +0.0 -0.5 +0.2 +0.1 +0.2
carbon source D-Ribose (C) 10 mM +0.2 -0.2 -0.2 -0.1 +0.4
carbon source L-Phenylalanine carbon 5 mM +0.1 +0.1 +0.3 -0.5 +0.0
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.3 -0.2 +0.1 +0.3 +0.1
carbon source D-(+)-Galactosamine (C) 10 mM -0.4 -0.1 +0.1 +0.3 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.5 -0.3 +0.5 +0.2 +0.2
carbon source Glycocyamine 10 mM (C) +0.4 -0.3 +0.2 -0.1 +0.0
carbon source L-tyrosine (C) 10 mM +0.2 -0.2 -0.1 -0.1 +0.5
carbon source Vanillic Acid (C) 2.5 mM -0.0 -0.3 +0.2 +0.2 +0.3
carbon source methyl-trans-p-coumarate (C) -0.2 -0.4 +0.2 -0.1 +1.0
carbon source methyl-trans-p-coumarate (C) -0.1 -0.4 +0.2 +0.1 +0.8
carbon source methyl ferulate (C) -0.4 +0.1 +0.2 +0.2 +0.4
carbon source L-Phenylalanine carbon 5 mM +0.2 +0.0 +0.2 -0.3 +0.4
carbon source L-tyrosine (C) 10 mM -0.2 +0.0 +0.1 +0.1 +0.5
carbon source methyl-trans-p-coumarate (C) +0.1 -0.2 -0.0 +0.1 +1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.0 +0.3 +0.5 -0.0 +0.2
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