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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_04953 and PFR28_04954 are separated by 291 nucleotides
PFR28_04954 and PFR28_04955 overlap by 4 nucleotides
PFR28_04955 and PFR28_04956 are separated by 235 nucleotides
PFR28_04956 and PFR28_04957 are separated by 3 nucleotides
PFR28_04953: PFR28_04953 - Maltodextrin phosphorylase, at 5,645,599 to 5,648,049
_04953
PFR28_04954: PFR28_04954 - hypothetical protein, at 5,648,341 to 5,651,976
_04954
PFR28_04955: PFR28_04955 - hypothetical protein, at 5,651,973 to 5,653,349
_04955
PFR28_04956: PFR28_04956 - Fructose-1,6-bisphosphatase class 1, at 5,653,585 to 5,654,595
_04956
PFR28_04957: PFR28_04957 - hypothetical protein, at 5,654,599 to 5,655,195
_04957
Group
Condition
PFR28
_04953
PFR28
_04954
PFR28
_04955
PFR28
_04956
PFR28
_04957
carbon source
methyl-trans-p-coumarate (C)
-1.7
-0.1
-0.1
N.D.
-0.4
carbon source
Guanosine (C)
-1.1
-0.2
-0.7
N.D.
-0.2
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-2.0
+0.1
-0.0
N.D.
-0.3
carbon source
methyl-trans-p-coumarate (C)
-1.6
+0.1
-0.5
N.D.
-0.1
carbon source
methyl ferulate (C)
-1.6
-0.1
-0.1
N.D.
-0.3
carbon source
caffeic (C)
-1.8
-0.3
-0.0
N.D.
+0.1
carbon source
methyl-trans-p-coumarate (C)
-1.4
+0.0
-0.3
N.D.
-0.2
carbon source
caffeic (C)
-1.9
+0.0
+0.1
N.D.
-0.0
carbon source
octanoate (C)
-1.2
-0.0
-0.3
N.D.
-0.2
carbon source
Guanosine (C)
-0.6
-0.2
+0.0
N.D.
-0.9
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-1.5
-0.2
+0.0
N.D.
-0.1
carbon source
caffeic (C)
-1.7
+0.0
-0.1
N.D.
+0.2
carbon source
Guanosine (C)
-1.1
-0.4
+0.1
N.D.
-0.2
carbon source
methyl ferulate (C)
-1.5
-0.0
+0.1
N.D.
-0.1
carbon source
Choline chloride (C)
-0.7
-0.1
+0.0
N.D.
-0.6
carbon source
NAG (C) 10 mM
-1.1
+0.0
-0.2
N.D.
-0.1
carbon source
octanoate (C)
-1.1
-0.1
-0.0
N.D.
-0.2
carbon source
methyl ferulate (C)
-1.4
-0.0
+0.1
N.D.
-0.1
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-1.5
+0.1
-0.0
N.D.
+0.2
carbon source
NAG (C) 10 mM
-1.1
-0.0
-0.2
N.D.
+0.2
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-1.5
+0.3
-0.2
N.D.
+0.2
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-1.1
+0.2
+0.2
N.D.
-0.3
carbon source
4-Acetoxy-3-methoxycinnamic (C)
-1.0
-0.0
-0.2
N.D.
+0.3
carbon source
caffeic (C) 2.5 mM
-1.1
-0.0
+0.0
N.D.
+0.3
carbon source
Vanillic Acid (C) 2.5 mM
-1.0
+0.0
-0.1
N.D.
+0.3
carbon source
caffeic (C) 2.5 mM
-1.0
+0.1
-0.0
N.D.
+0.2
carbon source
Vanillic Acid (C) 2.5 mM
-0.9
+0.2
-0.2
N.D.
+0.3
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-1.0
+0.1
+0.1
N.D.
+0.4
carbon source
p-Coumaric (C) 2.5 mM
-1.0
+0.0
+0.1
N.D.
+0.4
carbon source
caffeic (C) 2.5 mM
-0.9
+0.2
+0.2
N.D.
+0.2
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