Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04938 and PFR28_04939 are separated by 151 nucleotidesPFR28_04939 and PFR28_04940 are separated by 1 nucleotidesPFR28_04940 and PFR28_04941 are separated by 38 nucleotidesPFR28_04941 and PFR28_04942 are separated by 103 nucleotides PFR28_04938: PFR28_04938 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 5,630,566 to 5,632,095 _04938 PFR28_04939: PFR28_04939 - putative protein YibN, at 5,632,247 to 5,632,660 _04939 PFR28_04940: PFR28_04940 - Glutaredoxin 3, at 5,632,662 to 5,632,916 _04940 PFR28_04941: PFR28_04941 - Protein-export protein SecB, at 5,632,955 to 5,633,437 _04941 PFR28_04942: PFR28_04942 - 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11, at 5,633,541 to 5,633,996 _04942
Group Condition PFR28_04938 PFR28_04939 PFR28_04940 PFR28_04941 PFR28_04942
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM N.D. -0.4 -0.3 -4.5 +0.3
carbon source Betaine (C) 2.5 mM N.D. -0.3 -0.2 -2.1 +0.0
carbon source methyl ferulate (C) N.D. -1.6 +0.1 -1.1 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct N.D. -2.1 -0.0 -0.8 +0.5
carbon source Adenosine (C) 10 mM N.D. -1.5 -0.1 -0.6 -0.1
carbon source propionate (C) 20 mM N.D. -1.1 +0.1 -1.1 -0.3
carbon source D-(+)-Galactosamine (C) 10 mM N.D. -0.8 +0.2 -1.5 -0.2
carbon source Inosine (C) N.D. -2.3 +0.0 -0.2 +0.3
carbon source Shikimic Acid carbon 10 mM N.D. -1.4 +0.1 -0.9 +0.1
carbon source Azelaic carbon 10 mM N.D. -1.0 +0.4 -1.0 -0.4
carbon source Cytidine (C) N.D. -1.0 +0.0 -1.1 +0.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. +0.2 -0.4 -1.7 +0.2
carbon source caffeic (C) 2.5 mM N.D. -0.0 -0.4 -1.5 +0.2
carbon source Shikimic Acid carbon 10 mM N.D. -1.1 +0.2 -0.7 +0.2
carbon source Xanthosine (C) 10 mM N.D. +0.5 -0.1 -1.5 -0.2
carbon source Guanosine carbon 10 mM N.D. -0.9 +0.1 -0.9 +0.5
carbon source Shikimic Acid carbon 10 mM N.D. -0.8 +0.4 -0.9 +0.4
carbon source Glycocyamine 10 mM (C) N.D. +0.7 +0.1 -0.9 +0.5
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. +0.5 -0.1 -0.8 +0.9
carbon source methyl-trans-p-coumarate (C) N.D. -1.5 +0.1 +1.4 +0.8
carbon source methyl-trans-p-coumarate (C) N.D. -2.0 +0.6 +1.4 +0.8
carbon source Vanillic Acid (C) 2.5 mM N.D. -0.9 +1.1 +0.6 +0.2
carbon source L-Lactate (C) N.D. +0.3 +0.5 +1.3 +0.4
carbon source Choline chloride (C) N.D. +0.8 +0.5 +0.9 +0.4
carbon source Inosine carbon 10 mM N.D. +2.9 +0.4 -0.2 -0.3
carbon source octanoate (C) N.D. +0.3 +0.5 +1.9 +0.3
carbon source octanoate (C) N.D. +0.3 +0.6 +2.4 +0.0
carbon source Inosine carbon 10 mM N.D. +2.5 +0.5 +0.5 -0.1
carbon source octanoate (C) N.D. +0.3 +0.5 +2.3 +0.4
carbon source Inosine carbon 10 mM N.D. +2.5 +0.3 +0.7 +0.0
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