Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04851 and PFR28_04852 are separated by 301 nucleotidesPFR28_04852 and PFR28_04853 are separated by 486 nucleotidesPFR28_04853 and PFR28_04854 are separated by 3 nucleotidesPFR28_04854 and PFR28_04855 overlap by 1 nucleotides PFR28_04851: PFR28_04851 - Dibenzothiophene desulfurization enzyme C, at 5,542,209 to 5,543,450 _04851 PFR28_04852: PFR28_04852 - hypothetical protein, at 5,543,752 to 5,544,522 _04852 PFR28_04853: PFR28_04853 - L-cystine import ATP-binding protein TcyC, at 5,545,009 to 5,545,770 _04853 PFR28_04854: PFR28_04854 - L-cystine transport system permease protein YecS, at 5,545,774 to 5,546,439 _04854 PFR28_04855: PFR28_04855 - L-cystine-binding protein FliY, at 5,546,439 to 5,547,239 _04855
Group Condition PFR28_04851 PFR28_04852 PFR28_04853 PFR28_04854 PFR28_04855
carbon source butyrate (C) 10 mM -0.7 +0.0 -6.0 -0.3 +0.0
carbon source D-Glucosamine Hydrochloride (C) 10 mM -0.1 +0.1 -1.4 -0.0 -0.1
carbon source Glycocyamine 10 mM (C) +0.1 +0.0 -1.4 -0.1 -0.1
carbon source Guanosine (C) +0.2 -0.2 -1.4 -0.0 +0.1
carbon source NAG (C) 10 mM +0.1 -0.1 -1.4 -0.1 +0.1
carbon source 4-Guanidinobutyric (C) -0.1 +0.1 -1.2 -0.3 +0.1
carbon source propionate (C) 20 mM -0.2 +0.0 -1.1 -0.1 -0.1
stress D-Glucose (C); with Chloride 400 mM -0.1 +0.1 -1.2 -0.1 +0.1
carbon source Glycocyamine 10 mM (C) -0.1 -0.0 -1.1 +0.1 +0.1
carbon source methyl-trans-p-coumarate (C) -0.1 -0.1 -0.9 -0.1 +0.2
carbon source D-(+)-Galactosamine (C) 10 mM +0.0 +0.3 -1.2 +0.0 +0.0
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.1 +0.2 -0.9 -0.1 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.0 +0.2 -0.9 -0.1 +0.2
carbon source Azelaic carbon 10 mM +0.1 +0.0 -1.0 -0.1 +0.4
carbon source sn-glycero-3-phosphocholine (C) +0.3 +0.1 -0.5 -0.3 +0.2
carbon source Betaine (C) 2.5 mM -0.2 +0.3 -0.5 -0.2 +0.4
carbon source butyrate (C) -0.2 -0.1 +0.9 -0.1 -0.5
carbon source Betaine (C) -0.2 +0.5 +0.3 -0.1 -0.4
carbon source D-(+)-Galactosamine (C) 10 mM -0.0 -0.3 +1.0 -0.1 -0.1
carbon source butyrate (C) -0.2 -0.2 +1.0 -0.1 +0.1
carbon source Guanosine (C) -0.0 -0.2 +1.3 -0.5 +0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.0 -0.0 +1.0 -0.3 +0.0
carbon source L-Valine (C) 10 mM +0.0 +0.4 +0.6 +0.1 -0.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.2 +0.2 +0.8 -0.2 -0.1
carbon source L-Arginine (C) 10 mM -0.1 +0.3 +1.0 -0.1 +0.1
carbon source Xanthosine (C) 10 mM +0.1 +0.2 +1.0 +0.1 +0.0
carbon source Ferulic Acid (C) 2.5 mM +0.2 +0.2 +0.9 -0.0 +0.2
carbon source octanoate (C) +0.0 -0.4 +1.7 +0.1 +0.1
carbon source D,L-Malic Acid (C) 10 mM +0.0 +0.2 +1.2 +0.0 +0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 +0.0 +1.4 -0.0 +0.2
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