Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04822 and PFR28_04823 overlap by 4 nucleotidesPFR28_04823 and PFR28_04824 are separated by 105 nucleotidesPFR28_04824 and PFR28_04825 are separated by 84 nucleotidesPFR28_04825 and PFR28_04826 are separated by 97 nucleotides PFR28_04822: PFR28_04822 - Multidrug resistance protein MdtA, at 5,510,276 to 5,511,340 _04822 PFR28_04823: PFR28_04823 - Cobalt-zinc-cadmium resistance protein CzcA, at 5,511,337 to 5,514,417 _04823 PFR28_04824: PFR28_04824 - Cadmium-transporting ATPase, at 5,514,523 to 5,516,754 _04824 PFR28_04825: PFR28_04825 - Mercuric resistance operon regulatory protein, at 5,516,839 to 5,517,285 _04825 PFR28_04826: PFR28_04826 - Thymidylate synthase, at 5,517,383 to 5,518,354 _04826
Group Condition PFR28_04822 PFR28_04823 PFR28_04824 PFR28_04825 PFR28_04826
carbon source L-tyrosine 5 mM (C) +0.2 -0.1 -2.2 -0.5 N.D.
carbon source L-tyrosine 5 mM (C) +0.0 -0.1 -2.1 -0.2 N.D.
carbon source Ferulic Acid (C) 2.5 mM -0.2 -0.1 -1.9 -0.1 N.D.
carbon source Vanillic Acid (C) 2.5 mM -0.1 -0.3 -1.6 -0.3 N.D.
carbon source trans-aconitic (C) -0.1 -0.1 -1.6 -0.3 N.D.
carbon source p-Coumaric (C) 2.5 mM -0.3 -0.1 -1.4 -0.3 N.D.
carbon source Vanillic Acid (C) 2.5 mM +0.1 -0.2 -1.8 -0.3 N.D.
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.0 -0.2 -1.5 +0.6 N.D.
carbon source L-tyrosine 5 mM (C) +0.1 -0.1 -1.9 -0.1 N.D.
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -0.1 -2.2 +0.5 N.D.
carbon source p-Coumaric (C) 2.5 mM -0.1 -0.2 -1.5 -0.1 N.D.
carbon source Ferulic Acid (C) 2.5 mM -0.1 -0.2 -1.3 -0.3 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.6 -0.9 -1.0 +0.8 N.D.
carbon source p-Coumaric (C) 2.5 mM -0.3 -0.1 -1.4 +0.1 N.D.
carbon source Glycocyamine 20 mM (C) +0.1 -0.1 -1.2 -0.5 N.D.
carbon source Vanillic Acid (C) 2.5 mM -0.2 -0.2 -1.6 +0.3 N.D.
carbon source Guanosine (C) -0.2 +0.1 -0.1 -1.4 N.D.
carbon source Ferulic Acid (C) 2.5 mM -0.1 -0.1 -1.6 +0.2 N.D.
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.2 +0.1 -1.2 -0.7 N.D.
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.2 -0.2 -1.0 -0.1 N.D.
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.1 -0.1 -1.3 +0.1 N.D.
carbon source Glycocyamine 10 mM (C) +0.2 -0.1 -0.9 -0.5 N.D.
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM +0.2 -0.1 -1.4 +0.1 N.D.
carbon source trans-aconitic (C) 5 mM +0.2 +0.1 -1.5 -0.1 N.D.
carbon source trans-aconitic (C) 5 mM -0.0 +0.0 -1.4 +0.3 N.D.
carbon source trans-aconitic (C) 5 mM +0.0 +0.1 -1.3 +0.2 N.D.
carbon source trans-aconitic (C) +0.2 +0.0 -1.3 +0.1 N.D.
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.2 -0.2 -1.1 +0.5 N.D.
carbon source Glycocyamine 10 mM (C) +0.3 -0.1 -1.2 +0.3 N.D.
carbon source L-Phenylalanine carbon 5 mM +0.9 +1.0 -0.3 +0.5 N.D.
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