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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_04804 and PFR28_04805 are separated by 46 nucleotides
PFR28_04805 and PFR28_04806 are separated by 404 nucleotides
PFR28_04806 and PFR28_04807 are separated by 136 nucleotides
PFR28_04807 and PFR28_04808 are separated by 69 nucleotides
PFR28_04804: PFR28_04804 - hypothetical protein, at 5,485,366 to 5,485,677
_04804
PFR28_04805: PFR28_04805 - hypothetical protein, at 5,485,724 to 5,486,311
_04805
PFR28_04806: PFR28_04806 - hypothetical protein, at 5,486,716 to 5,487,459
_04806
PFR28_04807: PFR28_04807 - hypothetical protein, at 5,487,596 to 5,493,835
_04807
PFR28_04808: PFR28_04808 - hypothetical protein, at 5,493,905 to 5,495,389
_04808
Group
Condition
PFR28
_04804
PFR28
_04805
PFR28
_04806
PFR28
_04807
PFR28
_04808
carbon source
L-Leucine (C) 10 mM
N.D.
-0.5
-0.6
-0.7
-0.7
carbon source
D,L-Malic Acid (C) 10 mM
N.D.
-0.5
-0.6
-0.6
-0.6
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
N.D.
-1.0
-0.6
-0.3
-0.0
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
N.D.
+0.1
-0.7
-0.5
-0.5
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
N.D.
-0.1
-0.4
-0.6
-0.4
carbon source
p-Coumaric (C) 2.5 mM
N.D.
-0.2
-0.5
-0.4
-0.4
carbon source
Vanillic Acid (C) 2.5 mM
N.D.
+0.3
-0.8
-0.4
-0.4
carbon source
Vanillic Acid (C) 2.5 mM
N.D.
+0.3
-0.7
-0.5
-0.5
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
N.D.
+0.1
-0.4
-0.5
-0.5
carbon source
L-Leucine (C) 10 mM
N.D.
+0.0
-0.2
-0.5
-0.6
carbon source
4-Acetoxy-3-methoxycinnamic (C)
N.D.
-0.2
-0.1
-0.5
-0.6
carbon source
D,L-Malic Acid (C) 10 mM
N.D.
-0.1
-0.4
-0.4
-0.4
carbon source
caffeic (C) 2.5 mM
N.D.
+0.0
-0.4
-0.4
-0.4
carbon source
p-Coumaric (C) 2.5 mM
N.D.
+0.1
-0.6
-0.5
-0.3
carbon source
caffeic (C) 2.5 mM
N.D.
+0.1
-0.5
-0.4
-0.4
carbon source
Glycerol carbon 20 mM
N.D.
+0.2
-0.4
-0.4
-0.4
carbon source
trans-aconitic (C) 5 mM
N.D.
+0.2
-0.2
-0.5
-0.6
carbon source
caffeic (C) 2.5 mM
N.D.
+0.1
-0.3
-0.4
-0.4
carbon source
Ferulic Acid (C) 2.5 mM
N.D.
+0.3
-0.5
-0.4
-0.3
carbon source
L-Isoleucine carbon 10 mM
N.D.
+0.3
-0.3
-0.3
-0.4
carbon source
Vanillic Acid (C) 2.5 mM
N.D.
+0.6
-0.1
-0.5
-0.0
carbon source
propionate (C) 20 mM
N.D.
-0.2
+0.5
+0.4
+0.4
mixed carbon source
mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM
N.D.
-0.0
+0.3
+0.5
+0.5
mixed carbon source
mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM
N.D.
-0.2
+0.3
+0.5
+0.6
mixed carbon source
mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM
N.D.
-0.0
+0.4
+0.4
+0.6
carbon source
Guanosine (C)
N.D.
-0.0
+0.6
+0.3
+0.5
carbon source
D-Ribose (C) 10 mM
N.D.
+0.3
+0.5
+0.4
+0.2
carbon source
L-Phenylalanine 5 mM (C)
N.D.
-0.1
+0.5
+0.4
+0.5
carbon source
Guanosine (C)
N.D.
-0.5
+0.6
+0.8
+0.6
carbon source
L-Phenylalanine 5 mM (C)
N.D.
-0.0
+0.5
+0.5
+0.6
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