Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_04771 and PFR28_04772 are separated by 100 nucleotidesPFR28_04772 and PFR28_04773 are separated by 193 nucleotidesPFR28_04773 and PFR28_04774 are separated by 85 nucleotidesPFR28_04774 and PFR28_04775 overlap by 11 nucleotides PFR28_04771: PFR28_04771 - putative HTH-type transcriptional regulator, at 5,431,380 to 5,432,384 _04771 PFR28_04772: PFR28_04772 - hypothetical protein, at 5,432,485 to 5,433,558 _04772 PFR28_04773: PFR28_04773 - Ferrichrome outer membrane transporter/phage receptor, at 5,433,752 to 5,436,253 _04773 PFR28_04774: PFR28_04774 - Protein FecR, at 5,436,339 to 5,437,328 _04774 PFR28_04775: PFR28_04775 - putative RNA polymerase sigma factor FecI, at 5,437,318 to 5,437,866 _04775
Group Condition PFR28_04771 PFR28_04772 PFR28_04773 PFR28_04774 PFR28_04775
carbon source Guanosine (C) -1.0 -0.2 -0.2 -0.6 -0.5
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.0 -0.4 -0.2 -0.2 -0.7
carbon source sn-glycero-3-phosphocholine (C) -0.1 -0.3 -0.0 -0.5 -0.1
carbon source sn-glycero-3-phosphocholine (C) -0.2 -0.3 -0.1 -0.1 -0.2
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM -0.1 -0.0 -0.1 -0.3 -0.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.3 +0.1 -0.1 -0.4 -0.2
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.1 +0.2 +0.0 -0.5 -0.7
carbon source L-Carnitine (C) -0.1 -0.1 -0.0 -0.7 +0.0
carbon source Glycocyamine 20 mM (C) -0.7 -0.1 -0.0 +0.1 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 -0.1 +0.0 -0.6 +0.1
carbon source butyrate (C) 10 mM -0.6 +0.2 -0.1 -0.1 -0.1
carbon source L-tyrosine (C) 10 mM +0.1 -0.2 +0.1 -0.5 +0.0
carbon source Vanillic Acid (C) 2.5 mM +0.3 +0.1 +0.0 -0.9 -0.1
carbon source Cytidine (C) -0.6 +0.1 -0.1 +0.2 -0.2
carbon source butyrate (C) +0.2 -0.2 -0.1 +0.4 -0.6
carbon source L-Valine (C) 10 mM -0.2 -0.1 +0.1 -0.4 +0.2
carbon source D,L-Malic Acid (C) 10 mM -0.2 +0.0 +0.0 +0.4 -0.5
carbon source Vanillic Acid (C) 2.5 mM +0.4 -0.0 -0.1 -0.4 -0.1
carbon source butyrate (C) -0.4 -0.1 -0.1 +0.1 +0.4
carbon source L-Lactate (C) 10 mM +0.4 -0.0 +0.1 -0.1 -0.4
carbon source Vanillic Acid (C) 2.5 mM +0.4 -0.1 +0.2 -0.3 -0.3
carbon source L-Carnitine (C) 10 mM +0.3 -0.2 +0.1 +0.1 -0.3
carbon source Malonic (C) 10 mM +0.5 +0.1 +0.1 -0.4 +0.1
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.3 -0.2 -0.1 +0.3 +0.2
carbon source L-Lactate (C) 10 mM +0.4 +0.1 +0.1 +0.3 -0.3
carbon source L-Lactate (C) +0.3 +0.1 -0.1 +0.4 -0.0
carbon source butyrate (C) 10 mM +0.4 -0.1 +0.0 +0.5 -0.1
carbon source L-Hydroxyproline carbon 10 mM +0.5 -0.1 -0.0 +0.3 -0.0
carbon source L-Phenylalanine carbon 5 mM +0.1 -0.1 -0.1 +0.5 +0.2
carbon source Betaine (C) +0.1 +0.2 +0.1 +0.5 +0.3
remove
PFR28_04771
plot
remove
PFR28_04772
plot
remove
PFR28_04773
remove
PFR28_04774
plot
remove
PFR28_04775
plot