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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_04769 and PFR28_04770 are separated by 88 nucleotides
PFR28_04770 and PFR28_04771 are separated by 31 nucleotides
PFR28_04771 and PFR28_04772 are separated by 100 nucleotides
PFR28_04772 and PFR28_04773 are separated by 193 nucleotides
PFR28_04769: PFR28_04769 - hypothetical protein, at 5,430,049 to 5,430,573
_04769
PFR28_04770: PFR28_04770 - CRP-like cAMP-activated global transcriptional regulator, at 5,430,662 to 5,431,348
_04770
PFR28_04771: PFR28_04771 - putative HTH-type transcriptional regulator, at 5,431,380 to 5,432,384
_04771
PFR28_04772: PFR28_04772 - hypothetical protein, at 5,432,485 to 5,433,558
_04772
PFR28_04773: PFR28_04773 - Ferrichrome outer membrane transporter/phage receptor, at 5,433,752 to 5,436,253
_04773
Group
Condition
PFR28
_04769
PFR28
_04770
PFR28
_04771
PFR28
_04772
PFR28
_04773
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.1
-1.4
-0.0
-0.4
-0.2
carbon source
Guanosine (C)
-0.2
-0.0
-1.0
-0.2
-0.2
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.7
-0.6
-0.2
-0.1
+0.0
carbon source
methyl-trans-p-coumarate (C)
-0.4
-0.7
-0.2
+0.0
-0.1
carbon source
sn-glycero-3-phosphocholine (C)
-0.8
+0.2
-0.2
-0.3
-0.1
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-0.4
-0.5
-0.3
+0.1
+0.0
carbon source
Xanthosine (C)
+0.2
-0.9
-0.1
-0.1
+0.1
carbon source
Glycocyamine 20 mM (C)
+0.1
+0.1
-0.7
-0.1
-0.0
carbon source
butyrate (C)
+0.0
-0.5
+0.2
-0.2
-0.1
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-0.5
-0.6
+0.1
+0.2
+0.0
carbon source
Guanosine (C)
-0.0
-1.1
+0.4
+0.1
+0.0
carbon source
butyrate (C) 10 mM
-0.3
-0.5
+0.4
-0.1
+0.0
carbon source
L-tyrosine (C) 10 mM
+0.1
-0.5
+0.1
-0.2
+0.1
carbon source
Cytidine (C)
+0.2
-0.1
-0.6
+0.1
-0.1
carbon source
butyrate (C)
+0.6
-0.2
-0.4
-0.1
-0.1
carbon source
Vanillic Acid (C) 2.5 mM
-0.4
-0.3
+0.3
+0.1
+0.0
carbon source
Inosine (C)
+0.1
-0.5
+0.3
-0.0
-0.1
carbon source
methyl-trans-p-coumarate (C)
+0.2
-0.7
+0.3
+0.2
-0.0
carbon source
butyrate (C) 10 mM
+0.4
+0.0
-0.6
+0.2
-0.1
carbon source
Betaine (C)
-0.4
+0.4
+0.1
+0.2
+0.1
carbon source
L-Lysine (C) 10 mM
+0.3
-0.3
+0.4
-0.1
+0.0
carbon source
L-Proline carbon 10 mM
-0.2
+0.5
+0.1
-0.1
-0.0
carbon source
p-Coumaric (C)
+0.4
-0.5
+0.5
+0.0
-0.1
carbon source
L-Hydroxyproline carbon 10 mM
-0.1
+0.4
+0.5
-0.1
-0.0
carbon source
Cytidine carbon 10 mM
-0.1
+0.5
+0.3
+0.1
-0.1
carbon source
Azelaic carbon 10 mM
+0.5
+0.7
-0.0
-0.2
-0.2
carbon source
4-Aminobutyric carbon 10 mM
+0.2
+0.4
+0.3
-0.0
-0.1
carbon source
Guanosine (C)
+0.4
+0.7
+0.1
+0.1
-0.2
carbon source
L-Lactate (C) 10 mM
+0.2
+0.4
+0.4
+0.1
+0.1
carbon source
L-Lactate (C) 10 mM
+0.3
+0.6
+0.4
-0.0
+0.1
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