Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04766 and PFR28_04767 overlap by 4 nucleotidesPFR28_04767 and PFR28_04768 overlap by 4 nucleotidesPFR28_04768 and PFR28_04769 are separated by 143 nucleotidesPFR28_04769 and PFR28_04770 are separated by 88 nucleotides PFR28_04766: PFR28_04766 - hypothetical protein, at 5,425,804 to 5,427,168 _04766 PFR28_04767: PFR28_04767 - hypothetical protein, at 5,427,165 to 5,427,689 _04767 PFR28_04768: PFR28_04768 - Fructose dehydrogenase large subunit, at 5,427,686 to 5,429,905 _04768 PFR28_04769: PFR28_04769 - hypothetical protein, at 5,430,049 to 5,430,573 _04769 PFR28_04770: PFR28_04770 - CRP-like cAMP-activated global transcriptional regulator, at 5,430,662 to 5,431,348 _04770
Group Condition PFR28_04766 PFR28_04767 PFR28_04768 PFR28_04769 PFR28_04770
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.0 -0.3 -0.1 +0.1 -1.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.1 -0.0 -0.1 -0.7 -0.6
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.1 -0.2 -0.1 -0.5 -0.6
carbon source caffeic (C) 2.5 mM -0.0 -0.3 -0.2 -0.5 -0.2
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.0 -0.2 -0.1 -0.4 -0.5
carbon source methyl-trans-p-coumarate (C) -0.2 +0.2 -0.0 -0.4 -0.7
carbon source caffeic (C) 2.5 mM +0.1 -0.3 -0.1 -0.3 -0.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM -0.2 -0.4 -0.2 +0.2 -0.3
carbon source Guanosine (C) +0.0 +0.1 +0.1 -0.0 -1.1
carbon source Ferulic Acid (C) 2.5 mM +0.1 -0.3 +0.0 -0.5 -0.2
carbon source Vanillic Acid (C) 2.5 mM -0.2 -0.5 -0.2 -0.1 +0.1
carbon source Xanthosine (C) -0.1 -0.1 +0.0 +0.2 -0.9
carbon source sn-glycero-3-phosphocholine (C) -0.0 -0.2 +0.1 -0.8 +0.2
carbon source butyrate (C) 10 mM -0.2 +0.3 +0.0 -0.3 -0.5
carbon source Ferulic Acid (C) 2.5 mM +0.1 -0.1 -0.1 -0.4 -0.2
carbon source Betaine (C) -0.3 -0.1 -0.2 -0.4 +0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM -0.1 -0.3 -0.2 +0.2 -0.1
carbon source Choline (C) 10 mM -0.2 +0.2 +0.1 -0.2 -0.3
carbon source methyl ferulate (C) -0.1 -0.2 -0.1 -0.3 +0.3
carbon source methyl-trans-p-coumarate (C) +0.0 +0.0 +0.1 +0.2 -0.7
carbon source L-Carnitine (C) -0.1 -0.1 -0.1 +0.5 -0.3
carbon source p-Coumaric (C) -0.1 +0.0 +0.1 +0.4 -0.5
carbon source octanoate (C) -0.4 -0.2 +0.1 +0.3 +0.2
carbon source butyrate (C) -0.0 +0.2 +0.1 +0.6 -0.2
carbon source Guanosine (C) -0.2 -0.1 -0.1 +0.4 +0.7
carbon source acetate carbon 10 mM +0.2 -0.1 +0.0 +0.1 +0.6
carbon source D-Glucosamine Hydrochloride carbon 10 mM -0.0 +0.3 -0.0 +0.2 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.3 +0.5 +0.2 -0.0 +0.2
carbon source Azelaic carbon 10 mM +0.3 -0.0 -0.2 +0.5 +0.7
carbon source L-Lactate (C) 10 mM -0.1 +0.3 +0.3 +0.3 +0.6
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