Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04620 and PFR28_04621 are separated by 66 nucleotidesPFR28_04621 and PFR28_04622 are separated by 172 nucleotidesPFR28_04622 and PFR28_04623 are separated by 63 nucleotidesPFR28_04623 and PFR28_04624 are separated by 74 nucleotides PFR28_04620: PFR28_04620 - Zinc uptake regulation protein, at 5,275,709 to 5,276,191 _04620 PFR28_04621: PFR28_04621 - High-affinity zinc uptake system protein ZnuA, at 5,276,258 to 5,277,184 _04621 PFR28_04622: PFR28_04622 - Homoserine kinase, at 5,277,357 to 5,278,307 _04622 PFR28_04623: PFR28_04623 - hypothetical protein, at 5,278,371 to 5,278,658 _04623 PFR28_04624: PFR28_04624 - DNA polymerase I, at 5,278,733 to 5,281,501 _04624
Group Condition PFR28_04620 PFR28_04621 PFR28_04622 PFR28_04623 PFR28_04624
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -2.8 -0.0 N.D. -0.5 -0.9
carbon source Glycocyamine 10 mM (C) -1.7 -0.2 N.D. -1.2 -0.3
carbon source L-Carnitine (C) 10 mM -2.4 +0.1 N.D. -0.7 +0.2
carbon source L-Carnitine 10 mM (C) -0.8 -0.1 N.D. -1.4 -0.4
carbon source L-Carnitine 10 mM (C) -0.6 -0.3 N.D. -1.4 -0.3
carbon source L-Carnitine 10 mM (C) -0.5 -0.5 N.D. -1.2 -0.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -0.5 +0.0 N.D. -0.5 -1.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -1.0 -0.2 N.D. -0.6 -0.6
carbon source sn-glycero-3-phosphocholine (C) -1.1 -0.5 N.D. -0.8 +0.3
carbon source Choline chloride (C) -0.6 -0.5 N.D. -1.5 +0.6
carbon source Betaine (C) -1.1 +0.1 N.D. -1.1 +0.2
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -1.1 -0.3 N.D. +0.5 -1.0
carbon source L-Phenylalanine 5 mM (C) -0.2 +0.3 N.D. -0.5 -1.5
carbon source L-Phenylalanine 5 mM (C) -0.4 +0.3 N.D. -0.1 -1.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-benzoyl-L-phenylalanine 5 mM -0.3 +0.3 N.D. -0.9 -0.7
carbon source 4-Acetoxy-3-methoxycinnamic (C) -1.3 -0.7 N.D. -0.5 +1.0
carbon source 4-Acetoxy-3-methoxycinnamic (C) -1.7 -0.4 N.D. -0.1 +0.7
carbon source L-Phenylalanine 5 mM (C) +0.1 +0.5 N.D. -0.3 -1.7
carbon source butyrate (C) 10 mM -2.7 +0.4 N.D. +0.2 +0.8
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 +0.4 N.D. +0.1 -1.8
carbon source Choline (C) 10 mM -0.1 -0.0 N.D. -1.5 +0.8
carbon source Guanosine (C) +0.3 -1.4 N.D. +1.0 -0.5
carbon source Choline (C) 10 mM +0.2 -0.3 N.D. -1.1 +0.6
carbon source Quinic Acid (C) 10 mM -1.1 -0.2 N.D. -0.0 +1.0
carbon source Choline chloride (C) -0.3 +0.2 N.D. -1.0 +0.9
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.8 -0.1 N.D. -0.2 +1.2
carbon source Quinic Acid (C) 10 mM -0.7 +0.4 N.D. +0.3 +0.9
carbon source Xanthosine (C) 10 mM -0.0 +2.2 N.D. +0.1 -0.1
carbon source Xanthosine (C) 10 mM +0.1 +1.4 N.D. +0.1 +0.6
carbon source Xanthosine (C) 10 mM -0.2 +1.6 N.D. +0.5 +0.7
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PFR28_04620
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PFR28_04621
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PFR28_04624
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