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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_04614 and PFR28_04615 are separated by 550 nucleotides
PFR28_04615 and PFR28_04616 are separated by 220 nucleotides
PFR28_04616 and PFR28_04617 are separated by 87 nucleotides
PFR28_04617 and PFR28_04618 are separated by 37 nucleotides
PFR28_04614: PFR28_04614 - Methionine import ATP-binding protein MetN, at 5,267,651 to 5,268,658
_04614
PFR28_04615: PFR28_04615 - hypothetical protein, at 5,269,209 to 5,270,948
_04615
PFR28_04616: PFR28_04616 - Catalase HPII, at 5,271,169 to 5,273,307
_04616
PFR28_04617: PFR28_04617 - hypothetical protein, at 5,273,395 to 5,274,108
_04617
PFR28_04618: PFR28_04618 - High-affinity zinc uptake system membrane protein ZnuB, at 5,274,146 to 5,274,934
_04618
Group
Condition
PFR28
_04614
PFR28
_04615
PFR28
_04616
PFR28
_04617
PFR28
_04618
carbon source
Glycocyamine 20 mM (C)
-0.4
-0.1
-0.1
-0.2
-1.3
carbon source
4-Acetoxy-3-methoxycinnamic (C)
-0.4
+0.1
+0.0
-0.0
-1.5
carbon source
Glycocyamine 10 mM (C)
-0.0
+0.0
-0.1
-0.4
-1.2
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.3
+0.5
+0.2
-0.9
-1.0
carbon source
octanoate (C)
+0.1
+0.2
+0.1
-0.7
-0.9
carbon source
D,L-Malic Acid (C) 10 mM
-0.0
+0.3
-0.1
-0.4
-0.8
carbon source
Xanthosine (C)
+0.1
+0.2
+0.1
-0.6
-1.0
carbon source
2-Keto-D-gluconic hemicalcium salt (C) 10 mM
+0.2
+0.1
+0.0
-0.3
-1.1
carbon source
Guanosine (C)
+0.0
-0.1
-0.0
+0.8
-1.8
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
-0.3
+0.3
-0.0
+0.4
-1.3
carbon source
Betaine (C) 2.5 mM
-0.3
-0.0
-0.1
-0.9
+0.4
carbon source
L-Leucine (C) 10 mM
-0.2
+0.1
-0.1
-0.9
+0.4
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.2
+0.4
-0.2
+0.3
-0.8
carbon source
Choline chloride (C)
+0.0
+0.1
-0.1
-0.7
+1.0
stress
D-Glucose (C); with Chloride 200 mM
-0.3
+0.2
+0.1
-0.3
+0.8
carbon source
Cytidine (C)
-0.1
+0.1
-0.2
-0.4
+1.0
carbon source
p-Coumaric (C)
-0.1
-0.1
+0.1
-0.4
+1.1
carbon source
caffeic (C)
+0.1
-0.1
-0.1
-0.8
+1.7
carbon source
Inosine (C)
-0.1
+0.1
+0.1
-0.2
+1.0
carbon source
Xanthosine (C) 10 mM
+0.1
+0.0
+0.1
-0.5
+1.4
carbon source
L-Phenylalanine carbon 5 mM
-0.4
+0.1
+0.0
+0.5
+0.8
carbon source
L-Lactate (C) 10 mM
+0.2
-0.2
+0.2
+0.2
+0.8
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.2
-0.1
+0.1
+0.0
+1.6
carbon source
p-Coumaric (C)
-0.0
-0.1
-0.1
+0.2
+1.4
carbon source
butyrate (C)
+0.3
+0.1
-0.1
+0.6
+0.7
carbon source
D-(+)-Galactosamine (C) 10 mM
+0.1
+0.0
+0.1
-0.1
+1.5
carbon source
4-Guanidinobutyric (C)
+0.1
+0.1
+0.1
+0.4
+0.9
carbon source
Xanthosine (C) 10 mM
+0.0
+0.0
-0.1
+0.2
+1.6
carbon source
Xanthosine (C) 10 mM
+0.1
+0.1
+0.0
-0.5
+2.1
carbon source
4-Acetoxy-3-methoxycinnamic (C)
+0.5
+0.1
+0.1
+0.3
+1.1
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