Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_04558 and PFR28_04559 overlap by 10 nucleotidesPFR28_04559 and PFR28_04560 are separated by 0 nucleotidesPFR28_04560 and PFR28_04561 are separated by 78 nucleotidesPFR28_04561 and PFR28_04562 are separated by 126 nucleotides PFR28_04558: PFR28_04558 - hypothetical protein, at 5,206,339 to 5,207,700 _04558 PFR28_04559: PFR28_04559 - D-inositol-3-phosphate glycosyltransferase, at 5,207,691 to 5,208,821 _04559 PFR28_04560: PFR28_04560 - D-inositol-3-phosphate glycosyltransferase, at 5,208,822 to 5,209,952 _04560 PFR28_04561: PFR28_04561 - Disulfide-bond oxidoreductase YfcG, at 5,210,031 to 5,210,657 _04561 PFR28_04562: PFR28_04562 - HTH-type transcriptional regulator DmlR, at 5,210,784 to 5,211,686 _04562
Group Condition PFR28_04558 PFR28_04559 PFR28_04560 PFR28_04561 PFR28_04562
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.7 -0.6 -0.8 -0.1 +0.1
carbon source D-Trehalose (C) 5 mM -0.9 -0.6 +0.0 -0.2 -0.0
carbon source D-Trehalose (C) 5 mM -0.7 -1.1 +0.3 +0.1 -0.0
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.3 -0.3 -0.5 -0.0 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.4 -0.7 -0.4 -0.1 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.6 -0.4 -0.2 -0.4 +0.4
carbon source D-Trehalose (C) 5 mM -0.7 -0.7 +0.2 +0.1 +0.0
carbon source methyl ferulate (C) -0.4 -0.0 -0.4 -0.1 -0.2
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.2 -0.2 -0.6 -0.0 -0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.6 -0.4 -0.4 +0.3 +0.2
carbon source Guanosine carbon 10 mM -0.3 -0.4 -0.1 -0.2 -0.2
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.1 -0.4 -0.5 -0.1 +0.2
carbon source methyl ferulate (C) -0.4 -0.3 -0.3 +0.1 -0.0
carbon source Guanosine (C) -0.4 -0.2 -0.1 +0.2 +0.1
carbon source D-(+)-Galactosamine (C) 10 mM -0.2 -0.4 +0.3 +0.1 -0.1
carbon source D-(+)-Galactosamine (C) 10 mM -0.1 -0.5 +0.3 +0.1 +0.1
carbon source L-Hydroxyproline carbon 10 mM +0.2 +0.4 -0.0 -0.2 -0.2
carbon source Betaine (C) -0.3 +0.6 +0.0 +0.1 -0.0
carbon source D-Mannose carbon 10 mM +0.2 +0.4 -0.1 +0.1 -0.2
carbon source Inosine carbon 10 mM +0.2 +0.5 -0.0 -0.0 -0.2
carbon source D-Galactose (C) 10 mM +0.4 +0.4 +0.1 -0.0 -0.0
carbon source octanoate (C) 10 mM +0.3 +0.3 +0.3 +0.1 -0.1
carbon source octanoate (C) 10 mM +0.4 +0.5 +0.2 -0.1 -0.0
carbon source Inosine carbon 10 mM +0.5 +0.5 -0.0 -0.1 +0.1
carbon source L-Leucine (C) 10 mM +0.4 +0.5 +0.1 -0.1 +0.1
carbon source L-Leucine (C) 10 mM +0.4 +0.6 +0.1 -0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.1 +0.5 +0.5 -0.0 +0.4
carbon source octanoate (C) +0.7 +0.8 +0.7 +0.0 -0.1
carbon source octanoate (C) +0.8 +1.0 +0.7 -0.0 +0.0
carbon source octanoate (C) +0.9 +1.0 +0.8 -0.1 +0.1
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