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Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_04485 and PFR28_04486 are separated by 109 nucleotides
PFR28_04486 and PFR28_04487 are separated by 138 nucleotides
PFR28_04487 and PFR28_04488 are separated by 15 nucleotides
PFR28_04488 and PFR28_04489 are separated by 215 nucleotides
PFR28_04485: PFR28_04485 - Phosphate-specific transport system accessory protein PhoU, at 5,110,367 to 5,111,128
_04485
PFR28_04486: PFR28_04486 - Phosphate import ATP-binding protein PstB, at 5,111,238 to 5,112,071
_04486
PFR28_04487: PFR28_04487 - hypothetical protein, at 5,112,210 to 5,113,880
_04487
PFR28_04488: PFR28_04488 - hypothetical protein, at 5,113,896 to 5,116,181
_04488
PFR28_04489: PFR28_04489 - Phosphate-binding protein PstS, at 5,116,397 to 5,117,395
_04489
Group
Condition
PFR28
_04485
PFR28
_04486
PFR28
_04487
PFR28
_04488
PFR28
_04489
carbon source
Vanillic Acid (C) 2.5 mM
-1.5
-2.5
-2.1
-2.9
-2.6
carbon source
Vanillic Acid (C) 2.5 mM
-1.1
-2.0
-2.2
-2.7
-2.5
carbon source
sn-glycero-3-phosphocholine (C) 10 mM
-1.2
-2.2
-2.2
-2.2
-2.4
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct
-3.3
-2.4
-1.4
-1.6
-1.3
carbon source
sn-glycero-3-phosphocholine (C)
-0.5
-2.4
-2.1
-2.2
-2.6
carbon source
sn-glycero-3-phosphocholine (C) 10 mM
-1.6
-2.3
-1.9
-2.1
-1.8
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-3.0
-2.0
-1.3
-1.4
-1.7
carbon source
sn-glycero-3-phosphocholine (C)
-0.4
-2.5
-2.2
-2.0
-2.4
carbon source
sn-glycero-3-phosphocholine (C)
-0.2
-2.1
-2.2
-2.4
-2.2
carbon source
Vanillic Acid (C) 2.5 mM
-0.8
-1.6
-1.6
-2.4
-2.5
carbon source
octanoate (C) 10 mM
-2.6
-1.6
-1.2
-1.6
-1.2
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-2.9
-1.2
-1.2
-1.1
-1.3
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-2.6
-1.9
-0.8
-1.2
-1.2
carbon source
sn-glycero-3-phosphocholine (C) 10 mM
-1.2
-2.0
-1.2
-1.5
-1.7
carbon source
propionate carbon 20 mM
-2.4
-1.3
-0.7
-1.0
-2.1
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-2.3
-1.4
-1.0
-1.3
-1.3
carbon source
propionate carbon 20 mM
-1.8
-1.5
-0.8
-1.0
-2.2
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-3.7
-1.0
-0.6
-1.0
-1.0
carbon source
p-Coumaric (C) 2.5 mM
-2.4
-1.3
-0.8
-1.2
-1.3
carbon source
caffeic (C) 2.5 mM
-3.1
-1.0
-0.7
-1.0
-1.2
carbon source
octanoate (C)
-2.0
-1.4
-1.0
-1.1
-1.5
carbon source
propionate carbon 20 mM
-1.8
-1.2
-0.9
-1.0
-2.0
carbon source
octanoate (C) 10 mM
-2.1
-1.6
-0.9
-1.3
-0.9
carbon source
p-Coumaric (C) 2.5 mM
-2.7
-1.0
-0.8
-1.0
-1.2
carbon source
p-Coumaric (C) 2.5 mM
-1.9
-1.3
-0.9
-1.1
-1.3
carbon source
caffeic (C) 2.5 mM
-2.4
-1.1
-0.5
-0.9
-1.2
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
-4.3
+1.5
+1.5
+1.4
+1.3
carbon source
Inosine carbon 10 mM
+5.7
-0.3
-0.2
-0.2
+0.3
carbon source
Inosine carbon 10 mM
+6.2
-0.1
-0.2
-0.3
+0.0
carbon source
Inosine carbon 10 mM
+6.1
+0.1
+0.1
-0.2
+0.2
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